Protein

View in Explore
Genbank accession
YP_007238093.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANSLVVTPHPLTLDGQEFKTGELLPGQSLYGFLASNAPTALDGGWVVSIGGREVPVELWTKVFPKDGQIIEARSTVENSSTWALVALLALSFVTFGIAGAGGYVAGAYGATAAGAVYVAGAVIINKVLAPKAPKTGSSDTGGVYGLSGARNQPRQYQPFPLLFGSLKITPDLLSTPYSQFEGDNQYLALTLTPGINIDRVEGITNGDNPLSNYSDAHVWYSGMSGMQQDKIPLFSNVDSQPGGSLQDEDKNLTAVVRTTSPNTVRIQADIEYTLGDKTTKGKDKNNTEGVVVRYRPVGGGAYQTLGTQTVTNSDMRTHRMSISGDVPEGQYEVQVSRLGLAEVEGKGAFVNFTFSTLTSIQADLASYKGIARVALRLKATGELSGTPDEIKMVAHARPVQMWDGTNWKLANTRETGLSNPGAQMLAYIRGYFDEDGKLIGGMGLSDLFIDIPAFQAFMLHCSANSYTYDYYLRDARNHDEVLSSIAAAGFGQYTNSSGKISVAWAGAEQPISAVVGMGTIRDASFQVDYSLSNTADGIELAYFDRTVWETKTLRVAAPGTTTILNPVQITAEGVTDEARAAEIARYHLGQNLYQGKDISFATDLEHLSYRRMSVLSLSHDLTQWGFSGSILSAARVSGVVTLQLDTEVPPPATGNAYIGVRIPGEMTYRVLQVRAFTEPTTVVRLSGAWPIDAAFPGEGPDNPAWDTKFCYDFKTSPGYAVRVVSVEPDNDLAGATVSVVPESQEFWNYVKTGQYIPAPGGSSLSTRPISSNLAISENQVVQGDTVYTELTATFDITGPYDHTDVLMSNASAEMVKVATTDTRTATWRIPAAGVYTITVRPFSPEGVAGVASSLIYATIGADAPPVLADFFDVQQVSGGLRRYVWGFGADTIRSADYAGVEIRYMEGTVPAPVWENMLPIGAEGDDTQAGYHAAPFESSVPKSGTWTFALRSVNTSGKLSDNKLVLTRTLGKNLGELYEEMTSDISKAIVESFQRDEAETRARADAIRVVVAQIGEETEARNEAVQEVTDSLNKSIADQTAALLNERLEREAGIETANQLRQSGDESLAYQISQISAGTGMQFDGFKTWYFDESAEGWNGTSSGGFLNPGEVYATSPTGIGLNGDAYRFVKMRVKRSGRPVWAGELGWRSAGGTWSSVALAEPSWDPAGVGTVDLSDIPWTGTQVDQIRLKLTNTVTASTYYLYDWVAIGRPTPGASVALVEEVRRAVVTAAATEAQQRNTLAVQLRGQYSGNELQGLTSGLVYQERTARVTADSAISTRVDGLQVSLDGKASAAALESLTVKLEDLDGEVTSMAESVFSLEAQLDGESAGETDWTAGETDVYAGTKTVYTVVAEADLALSRRVDTVQADFGDFSSSVTDQLESISTDIDAQAQLYQQVSASLATKASTSAVNLLTARVTQNESNITANSQNIATAQAELAGKASASSVQALQTTVSTIDGKTTANSNALTQVQVSVDGKASASTVFELTATVNAQGSTINSINSQAFLALNSNGYIGGVKIGNNGSVVDLTVLADKFQIVSPAGGQRLEYSQGNIRVYDNAGTLRVRLGVW
Physico‐chemical
properties
protein length:1573 AA
molecular weight: 167692,60730 Da
isoelectric point:4,69805
aromaticity:0,08137
hydropathy:-0,15893

Domains

Domains [InterPro]
DC_0129
STR
1–1095
DC_0129 DC_0793 DC_2243
IPR053171
Unmapped
627–1027
IPR053171 DC_1045
cd22265
Unmapped
976–1028
cd22265
YP_007238093.1
1 1573
Architecture
STR
STR
RBD
STR 1-1095 | STR 1150-1480 | RBD 1541-1573
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage CP1
[NCBI] 		2994055 Uroviricota > Caudoviricetes > Klementvirus >
Host Xanthomonas citri
[NCBI] 		346 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007238093.1 [NCBI]
Genbank nucleotide accession
NC_019933.2 [NCBI]
CDS location
range 16710 -> 21431
strand +
CDS
ATGGCAAACTCACTTGTTGTAACTCCCCACCCGCTGACGCTGGATGGGCAAGAATTCAAGACCGGGGAATTGCTCCCTGGTCAATCGCTGTATGGCTTCCTGGCATCAAATGCGCCCACGGCTCTTGACGGTGGGTGGGTAGTGTCAATTGGTGGCAGGGAAGTCCCGGTGGAGCTCTGGACCAAGGTTTTCCCAAAAGACGGTCAGATCATTGAGGCACGCAGCACAGTAGAAAACTCCAGCACATGGGCATTGGTGGCACTCCTTGCGTTATCGTTCGTCACGTTCGGCATTGCAGGTGCAGGTGGCTACGTAGCGGGTGCTTATGGCGCAACTGCAGCAGGTGCAGTGTATGTTGCAGGCGCGGTCATTATCAATAAGGTCCTGGCACCCAAGGCCCCAAAGACCGGTAGCTCAGACACTGGTGGGGTGTATGGCCTCAGCGGTGCACGCAACCAGCCACGGCAGTATCAGCCGTTCCCACTATTGTTTGGTTCCCTGAAGATTACCCCAGACCTGCTCAGCACCCCATACAGCCAATTTGAAGGCGACAACCAGTATCTTGCTCTTACCCTGACGCCGGGTATCAACATTGACAGGGTCGAAGGGATCACAAACGGGGACAACCCCCTGTCAAATTACTCGGACGCCCACGTGTGGTATTCGGGGATGTCTGGCATGCAGCAGGACAAAATCCCGTTGTTTAGCAACGTTGATTCTCAGCCGGGTGGCAGCCTGCAAGATGAGGACAAAAACCTAACCGCAGTCGTCCGTACTACTTCGCCTAATACCGTACGGATTCAGGCAGATATCGAATACACCCTTGGTGACAAGACCACAAAGGGCAAGGACAAAAACAATACGGAAGGTGTAGTGGTGCGCTATCGGCCTGTGGGCGGTGGTGCCTATCAGACCCTTGGAACCCAGACTGTCACTAATAGTGATATGCGCACACACCGCATGAGCATTAGTGGGGATGTGCCCGAGGGGCAGTATGAGGTGCAGGTATCCCGCTTAGGGCTTGCAGAGGTGGAAGGCAAGGGTGCATTTGTAAACTTCACGTTTTCAACCCTTACCAGCATCCAGGCGGATTTGGCTAGCTATAAGGGCATTGCCCGTGTAGCCCTCAGGCTTAAGGCCACAGGTGAGCTCTCCGGTACGCCCGACGAGATTAAGATGGTGGCCCACGCCCGCCCTGTGCAGATGTGGGATGGTACCAACTGGAAGTTGGCCAACACTCGTGAAACTGGTCTAAGCAACCCCGGTGCGCAGATGCTTGCATACATTCGGGGATACTTTGATGAGGATGGCAAGCTTATTGGTGGCATGGGGTTAAGTGATCTATTTATTGACATCCCAGCTTTCCAAGCCTTCATGCTGCACTGCTCGGCCAACAGCTACACGTATGACTATTATTTACGTGACGCACGTAATCACGATGAGGTACTAAGTTCAATTGCTGCAGCAGGTTTCGGGCAGTACACAAACAGCTCCGGCAAGATTTCCGTAGCATGGGCGGGTGCAGAGCAGCCCATCTCCGCCGTTGTTGGCATGGGGACTATCCGGGATGCCTCCTTCCAAGTAGACTACAGCCTCAGCAACACTGCGGATGGGATTGAGCTGGCGTACTTTGACCGCACTGTATGGGAAACCAAGACGCTACGTGTGGCTGCACCGGGCACAACCACAATCCTAAACCCCGTGCAAATAACCGCAGAGGGTGTAACGGATGAGGCAAGGGCTGCAGAGATTGCTCGGTATCACCTAGGGCAAAACCTGTATCAGGGTAAGGACATTAGCTTTGCTACAGACTTGGAGCATCTGTCTTACCGCCGTATGTCTGTCCTATCCCTGTCACATGACCTCACACAGTGGGGGTTTAGTGGCAGCATCCTAAGTGCAGCTAGGGTGTCGGGTGTTGTCACTCTCCAGCTAGATACGGAGGTGCCTCCACCTGCAACGGGCAATGCATACATCGGTGTTCGTATCCCAGGTGAGATGACTTACCGTGTGCTGCAAGTGCGGGCATTCACTGAGCCAACTACCGTGGTCCGCCTAAGTGGGGCATGGCCGATTGATGCAGCATTTCCGGGCGAGGGCCCGGATAATCCCGCTTGGGACACTAAGTTCTGCTATGACTTCAAGACGTCACCGGGTTACGCCGTCCGTGTTGTTTCCGTCGAGCCAGATAATGACCTTGCCGGGGCAACCGTTTCCGTTGTGCCCGAGAGCCAGGAATTCTGGAACTACGTCAAGACGGGTCAGTACATCCCGGCACCGGGTGGCTCTAGTCTATCCACGCGGCCAATCTCCAGCAATTTGGCGATTAGTGAGAATCAGGTTGTTCAAGGTGATACTGTCTACACAGAGCTAACCGCCACGTTTGACATCACAGGCCCATACGACCACACCGATGTATTGATGTCTAATGCCTCAGCAGAGATGGTAAAGGTTGCTACTACGGACACCCGTACCGCAACTTGGAGAATCCCTGCTGCTGGCGTGTACACCATCACAGTACGGCCGTTTAGCCCAGAGGGTGTTGCCGGTGTTGCATCCAGCCTGATCTATGCAACTATTGGTGCAGATGCTCCTCCTGTGCTTGCTGACTTCTTCGATGTGCAGCAAGTGTCTGGAGGTCTCCGTCGTTACGTGTGGGGGTTTGGTGCAGACACAATCCGCAGTGCAGACTATGCAGGCGTGGAAATTCGCTACATGGAGGGAACTGTGCCTGCGCCGGTTTGGGAAAATATGCTCCCCATTGGTGCAGAGGGGGATGACACACAGGCAGGCTACCATGCTGCCCCGTTTGAAAGCTCCGTGCCAAAGTCGGGAACTTGGACGTTTGCCCTCAGGTCTGTAAATACATCGGGGAAGCTGTCTGACAATAAGCTGGTTCTGACACGTACACTAGGAAAGAATCTCGGCGAACTCTATGAGGAGATGACTAGTGACATATCGAAAGCGATTGTGGAGTCTTTCCAGCGGGATGAGGCAGAGACTCGTGCACGTGCTGATGCAATTCGTGTGGTTGTTGCCCAAATAGGTGAGGAGACAGAAGCACGCAACGAGGCTGTACAGGAGGTAACGGACAGCCTCAATAAATCCATCGCGGATCAAACCGCTGCCCTTCTAAACGAGCGCCTAGAGCGGGAGGCAGGCATTGAGACTGCTAACCAGCTTCGTCAATCAGGGGATGAATCCCTGGCATACCAAATCTCGCAGATCAGCGCAGGTACTGGTATGCAGTTCGATGGATTCAAGACCTGGTACTTCGACGAGAGTGCAGAAGGGTGGAACGGGACTTCTTCAGGGGGCTTCCTGAACCCAGGTGAAGTGTATGCCACATCTCCAACAGGCATTGGTCTGAATGGGGATGCTTACCGATTCGTTAAGATGCGTGTGAAGCGCTCTGGTAGACCCGTGTGGGCTGGCGAACTAGGGTGGCGTAGTGCTGGTGGCACTTGGTCCTCGGTGGCCCTTGCAGAGCCATCGTGGGACCCTGCGGGCGTTGGTACGGTGGACCTGTCTGATATCCCGTGGACAGGAACCCAGGTGGACCAAATCAGGCTGAAGCTAACCAATACGGTTACTGCATCCACTTACTACTTGTATGATTGGGTAGCCATTGGTAGGCCTACTCCTGGTGCTTCCGTGGCCCTGGTGGAGGAAGTTCGCCGGGCGGTAGTTACGGCAGCTGCCACTGAAGCACAACAGCGCAACACCCTGGCTGTGCAGCTTCGTGGGCAGTACTCAGGTAATGAGTTGCAGGGCCTGACAAGTGGCCTTGTCTACCAGGAGCGTACGGCCCGTGTAACGGCGGACTCAGCAATCAGCACACGTGTAGATGGACTACAGGTATCATTGGATGGCAAGGCATCTGCTGCCGCCCTGGAAAGCCTGACTGTAAAGTTGGAAGACCTTGATGGTGAAGTTACCAGTATGGCTGAGTCTGTGTTCTCACTGGAGGCTCAGTTAGATGGTGAGAGTGCTGGTGAAACGGATTGGACGGCAGGAGAAACGGATGTCTACGCTGGCACTAAGACGGTTTACACGGTTGTTGCTGAGGCGGACCTCGCCCTGTCTCGCCGGGTGGATACAGTGCAGGCGGATTTTGGCGACTTTTCGTCGAGTGTCACAGATCAGCTAGAAAGCATCAGTACGGATATAGATGCACAAGCTCAGCTATACCAGCAAGTGTCAGCAAGCCTAGCCACAAAGGCCAGCACATCTGCTGTAAATCTGCTGACCGCCCGCGTGACACAGAACGAATCCAACATAACAGCTAACTCGCAAAACATCGCTACGGCGCAGGCGGAGCTAGCAGGTAAGGCCAGTGCCAGCTCTGTGCAGGCGCTGCAAACCACGGTATCCACCATTGATGGCAAGACCACAGCTAACTCCAATGCCCTCACCCAAGTTCAGGTGAGTGTGGATGGTAAGGCATCTGCTAGCACAGTATTTGAGCTCACAGCTACGGTCAACGCCCAGGGCAGTACTATCAACTCTATAAACTCGCAAGCTTTCCTGGCACTTAATTCCAACGGCTACATCGGCGGTGTCAAGATTGGTAATAATGGCTCCGTGGTTGATCTTACAGTTCTTGCGGACAAGTTCCAGATTGTATCACCTGCAGGTGGTCAGCGCCTTGAGTACAGCCAAGGAAACATAAGGGTCTATGACAATGCAGGGACTCTCCGAGTCCGACTTGGTGTCTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
08c558dad8a90bd2431fc896429eabd10ff2f4e89195ca6e9129ad59a6170b0f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7575
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50