Protein

View in Explore
Genbank accession
QXO12792.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MFPSPVLVVYGNTRPPLEPFDRPLQTNYTNTMFLKDNTLYGYGQNNYSQLGLGTTSNVPTFTVCKNGVWKYFLGVHGTLVLGTDLQIYYSGSAVAFPQIGTNTTTWLNVTQYFSAIGVSVYDIADCYIGQCIRILTTSGQYVYCGRNTYGEIGNGSSGSDILSLTIHSTLNGIKKLRCSFVGTHFIDSFNNVLFCGQNSYGEGGVGSTAIITTPTQSRTGVFEIGATYTTTWYYLLSGQIYWSGNNGSGQAGVGSLSPTSSTVPIINNSISFNPVQRFYTQCNTTNANSGSPLYLSNGTIRHCGRNEYGQIGNGNTTTPISSVYTLNLTALGGIDNINTISKDWSKILILTNSGDLWGAGGATGNGTQLPDGNIVRTTLTKMNGMPF
Physico‐chemical
properties
protein length:387 AA
molecular weight: 41584,01680 Da
isoelectric point:8,03729
aromaticity:0,11370
hydropathy:-0,10620

Domains

Domains [InterPro]
DC_0433
ATT
1–129
DC_0433 IPR009091 IPR009091
IPR009091
STR
24–128
IPR009091 DC_1778 IPR009091
IPR009091
STR
32–283
IPR009091
DC_1778
STR
255–385
DC_1778
QXO12792.1
1 387
Architecture
ATT
STR
ATT 1-129 | STR 130-385 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO12792.1
1 387
Domain Start End Length (AA) Confidence
N-terminal 1 222 222 0,1023
Central domain 223 376 155 0,4230
C-terminal 377 387 10 0,3279
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-222
Central
223-376
C-terminal
377-387

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_49
[NCBI] 		2859284 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO12792.1 [NCBI]
Genbank nucleotide accession
MW879344 [NCBI]
CDS location
range 350319 -> 351482
strand -
CDS
ATGTTTCCGAGTCCAGTACTAGTAGTATATGGAAATACAAGACCTCCATTAGAACCGTTTGACAGACCACTTCAAACGAATTATACTAACACAATGTTTTTAAAAGATAATACATTATATGGATATGGTCAAAATAATTATTCACAACTAGGTTTAGGTACAACTTCAAATGTTCCTACTTTTACAGTATGTAAAAATGGAGTATGGAAATATTTTTTAGGCGTACATGGAACATTAGTTTTAGGAACTGATTTACAAATTTATTATTCTGGAAGTGCTGTTGCATTTCCACAAATTGGTACTAATACTACTACATGGTTAAACGTAACACAATATTTTTCTGCAATTGGTGTAAGTGTATATGATATTGCAGATTGTTATATTGGTCAATGTATTAGAATTTTAACTACAAGTGGTCAATATGTTTATTGTGGTCGAAATACATATGGTGAAATTGGTAATGGTAGTTCAGGTTCAGATATTTTAAGTCTTACGATACATAGTACTCTTAATGGAATTAAAAAATTACGTTGTTCTTTTGTTGGGACACATTTTATTGATTCATTTAACAATGTTTTATTTTGTGGTCAAAATAGCTATGGGGAAGGTGGGGTAGGAAGTACTGCAATTATAACTACACCAACACAATCTAGAACCGGTGTTTTTGAAATTGGAGCTACATATACTACAACATGGTATTACTTATTGAGTGGGCAAATATATTGGTCTGGTAATAATGGTTCTGGTCAAGCTGGTGTTGGTAGTCTTTCACCAACGTCAAGTACTGTTCCTATAATTAATAATTCTATATCATTTAATCCAGTACAAAGATTTTATACTCAATGTAATACAACTAATGCTAATTCAGGTTCACCATTATATTTAAGCAATGGTACAATACGTCATTGTGGTCGAAATGAATATGGACAAATAGGCAATGGTAATACAACTACACCAATAAGTTCAGTATATACTCTAAATCTTACAGCATTAGGAGGTATAGATAATATTAATACTATTTCAAAAGATTGGTCCAAGATATTAATATTAACAAATTCTGGTGATTTATGGGGTGCGGGGGGAGCTACTGGTAACGGAACACAGTTGCCTGATGGAAATATAGTACGAACTACATTAACAAAAATGAATGGGATGCCATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5ac86c37d0f6ec8ba3910b9991fa26a2902a2d55f32f498e3ab8e35406bd9b42
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8839
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_49 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank