Protein

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Genbank accession
YP_009125737.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,61
Protein sequence
MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKANDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPDTAAATVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGTGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDAATDTYSLNELDYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPRVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV
Physico‐chemical
properties
protein length:826 AA
molecular weight: 91942,63700 Da
isoelectric point:6,15347
aromaticity:0,10775
hydropathy:-0,33923

Domains

Domains [InterPro]
IPR058003
TTP
1–817
IPR058003
DC_0058
STR
1–826
DC_0058
YP_009125737.1
1 826
Architecture
STR
STR 1-826
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009125737.1
1 826
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9902
Central domain 140 338 200 0,2788
C-terminal 339 826 487 0,3157
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-338
C-terminal
339-826

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_PAO1_Ab05
[NCBI] 		1548902 Uroviricota > Caudoviricetes > Autographivirales > Krylovirinae > Phikmvvirus
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009125737.1 [NCBI]
Genbank nucleotide accession
NC_026602 [NCBI]
CDS location
range 26800 -> 29280
strand +
CDS
ATGAGCTACAAGCAATCCGCGTATCCCAATCTGCTGATGGGTGTGAGCCAGCAGGTGCCCTTCGAGCGCCTGCCGGGCCAGCTCAGCGAGCAGATCAACATGGTATCCGATCCCGTGTCAGGACTTCGGCGGCGTAGCGGTATCGAGCTGATGGCCCACCTGCTGCATACCGACCAGCCCTGGCCGAGGCCGTTCCTCTACCACACGAACCTCGGTGGCCGCAGCATTGCGATGCTGGTGGCGCAGCACCGTGGCGAGCTGTACCTGTTCGACGAGCGGGACGGTCGCCTGCTGATGGGTCAGCCCCTGGTGCATGACTACCTCAAGGCCAACGATTACAGGCAGCTACGGGCCGCCACGGTGGCCGATGACCTGTTCATCGCCAACCTGAGTGTAAAGCCCGAGGCCGACCGCACCGACATCAAGGGCGTAGACCCCAACAAGGCCGGCTGGCTGTACATCAAGGCAGGCCAGTATTCGAAGGCATTCTCCATGACCATCAAGGTCAAGGACAATGCCACCGGTACGACCTACAGCCATACGGCCACCTACGTGACGCCGGACAACGCCAGCACCAACCCCAACCTCGCCGAGGCTCCATTCCAGACGAGTGTGGGCTACATCGCGTGGCAGCTCTACGGCAAGTTCTTCGGCGCGCCGGAGTACACCCTGCCCAACTCCACGAAGAAGTACCCGAAGGTTGACCCCGACACGGCTGCGGCTACGGTAGCCGGCTATCTCAACCAGCGGGGCGTGCAGGACGGCTACATCGCCTTCCGAGGCGACGGGGACATCGTGGTCGAGGTGTCTACGGATATGGGCAACAACTACGGCATCGCCTCGGGCGGTATGAGCCTCAACGCCACCGCAGACCTGCCGGCCCTGCTGCCGGGTGCGGGCACTCCGGGCACTGGCGTGCAGTTCATGGACGGGGCCGTCATGGCCACCGGCTCGACCAAGGCGCCGGTCTACTTCGAATGGGACTCGGCGAACCGCCGCTGGGCGGAGCGCGCAGCCTACGGGACCGATTGGGTCTTGAAGAAGATGCCCTTGGCCCTGCGCTGGGACGCGGCGACCGACACCTACAGCCTGAACGAGCTGGACTACGACCGGCGCGGCTCCGGCGACGAGGACACGAACCCAACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACGACCTTCCAGGGTCGGCTGGTCCTCCTGTCTCAGGAGTACGTCTGTATGTCGGCGAGCAACAACCCGCACCGCTGGTTCAAGAAATCGGCAGCGGCGCTCAACGACGACGATCCCATCGAGATCGCGGCCCAGGGCAGCCTGACCGAGCCGTATGAGCACGCAGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTATCAGGCCGTGGTCCCCGGTGGCGGCATTGTAACTCCCCGCACGGCGGTTATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGCCGTAGTGTGTACTTCGCTGCGGAGCGTGCCCTGGGTTTCATGGGCCTGCATGAGATGGCCCCGTCTCCGTCCACGGACAGCCACTACGTCGCCGAAGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCTGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTCGGCACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGGCAACGAGAAAGTGCAGAACGCGTTTCATCGCTGGACGTTGCGGCATCAGATCATCGGCGCCTACTTCACTGGCGACAACCTGATGGTTCTGATTCAGAAGGGCCAGGAGATCGCCCTGGGACGGATGCACCTGAACAGCCTGCCAGCCCGTGAGGGTCTGCAATACCCTAAATACGACTACTGGCGGCGTATCGAGGCGACCGTCGATGGTGAGCTGGAACTGACCAAGCAGCATTGGGACCTGATCAAGGATGCCTCCGCAGTGTACCAGCTACAGCCTGTGGCCGGCGCCTACATGGAGCGTACCCATCTCGGCGTGAAGCGCGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTGGTCGGGGCGGTGTATGTGGTCGGCTGCGAGTTCTGGTCGAAGGTGGAGTTCACTCCGCCGGTTCTCCGGGACCACAATGGCCTGCCCATGACCTCGACCCGTGCAGTGCTTCATCGGTACAACGTAAACTTCGGCTGGACCGGCGAGTTCCTGTGGCGCATCAGCGACACGGCTCGACCCAACCAGCCGTGGTACGACACGACGCCCCTTCGGTTGTTCAGCCGGCAACTCAATGCCGGGGAGCCTCGGGTGGATAGCGCTGTGGTGCCGCTGCCGGCACGGGTCGATATGGCCACGTCTAAGTTCGAGCTGAGCTGTCACAGTCCGTACGACATGAACGTTCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAACCTACAGGAGGGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef477f694223ca192d9f3f57335d1f467a3a322ee7c34396d5f36580b03ba40e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8454
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50