Protein

View in Explore
Genbank accession
WJJ55283.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,76
Protein sequence
MSATGTLLTKNAMGMAGLGTLQAQTGGVPTPNGGASGNRFVILNRSGYMAYATLDTNKGYSLVLVPNAGSGTPQAPIPFPNMIGQDQSKYFLTMYADPTIDVIYVSVGYPSSLWVYKYQVNATLNSMTLINVINPLSNTNLGGASQAFQEVNLGNGLTIGLGISQLGVNGSYNTSYVLGYLYNPNIGSTEPMSMITPTNNIVTYQNIVTSLATVNNVFVVNGEVYLLWGNLEHSYSLYHITTDGTTISASLLQTFNMVNPQMYGDFNYQPLALDVTTDGSQYIWISKATKLNSGQYVLDIMKYDVIGNQVVWEVQPLTFQNAQVCYLSSILFDGSIYVVFETLNNDGGDIQYAKFDSGTGSLISQSTYLSSQDGTPSWSPKIGVVGNILYCSYVYGVQSNTFTPSNVYYVKLDESSQVSLQVRDISKTFSNVYLSAPVHIQSNSVSKSYSLASFSKQTAGLSALDIGRSSSVASMLIVTPQSSNGQGLVNVIDLQGKFVINVTMKGSA
Physico‐chemical
properties
protein length:508 AA
molecular weight: 54622,93170 Da
isoelectric point:4,89869
aromaticity:0,10433
hydropathy:0,05610

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJJ55283.1
1 508
Domain Start End Length (AA) Confidence
N-terminal 1 507 507 0,9988
Central domain 508 507 1 0,3152
C-terminal 508 508 0 0,0000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-507
Central
508-507
C-terminal
508-508

Taxonomy

  Name Taxonomy ID Lineage
Phage Dabrowskivirus KKP3916
[NCBI] 		3428177 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alicyclobacillus acidoterrestris
[NCBI] 		1450 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJJ55283.1 [NCBI]
Genbank nucleotide accession
OQ846916 [NCBI]
CDS location
range 41892 -> 43418
strand +
CDS
ATGAGTGCCACTGGAACATTATTAACAAAAAATGCTATGGGTATGGCGGGTCTAGGGACACTACAGGCGCAAACAGGCGGTGTACCAACACCAAATGGCGGCGCAAGTGGGAACAGGTTTGTCATATTAAACAGGTCTGGATACATGGCTTATGCGACATTAGATACAAATAAAGGGTATTCTCTAGTTTTAGTCCCAAATGCAGGATCGGGTACTCCACAAGCCCCAATTCCATTCCCGAATATGATTGGGCAAGATCAGTCTAAATACTTTTTAACCATGTATGCAGATCCAACAATTGACGTTATCTATGTAAGTGTTGGCTATCCGTCTTCTCTGTGGGTTTACAAATACCAAGTTAATGCAACACTCAACAGTATGACTCTCATTAATGTGATCAACCCTCTCAGCAACACAAACCTTGGCGGTGCGAGTCAAGCGTTTCAGGAAGTAAACTTAGGGAATGGCTTGACTATTGGATTGGGAATATCGCAACTTGGCGTCAATGGCTCATACAATACATCTTATGTTTTAGGATACCTATATAATCCAAACATAGGTTCTACTGAGCCTATGTCAATGATTACCCCAACGAATAATATTGTGACGTATCAAAATATCGTTACATCATTAGCTACCGTAAATAATGTATTCGTTGTTAATGGTGAAGTATATTTGCTTTGGGGGAATCTTGAGCATTCGTATTCTCTGTATCATATCACAACGGATGGTACGACAATTTCTGCTAGTCTTTTGCAAACATTTAATATGGTCAACCCGCAGATGTATGGTGATTTCAATTATCAACCATTAGCATTGGATGTTACGACAGACGGATCTCAATACATTTGGATTTCCAAAGCAACAAAATTAAACAGCGGTCAATATGTTTTAGACATTATGAAATATGACGTTATTGGGAATCAAGTTGTGTGGGAAGTTCAACCGCTAACGTTTCAAAATGCCCAAGTATGTTACCTGTCAAGCATTCTCTTTGACGGTAGTATATATGTAGTATTTGAAACTTTAAATAATGACGGTGGCGATATTCAATATGCGAAATTCGATAGTGGGACTGGATCTTTAATTTCCCAATCAACATACCTTTCCTCGCAAGATGGTACACCTTCTTGGTCTCCTAAGATCGGCGTAGTTGGCAATATACTATATTGCTCATATGTGTATGGAGTTCAATCTAATACATTTACACCATCTAACGTTTATTATGTAAAGCTGGACGAAAGTTCTCAGGTCTCATTGCAGGTCAGGGATATATCAAAAACATTTTCAAATGTATACCTTTCTGCTCCAGTTCACATCCAATCCAATTCAGTGTCTAAATCTTATAGTTTAGCTTCTTTTTCTAAGCAAACAGCAGGGCTGTCTGCATTGGATATTGGGAGAAGTTCAAGTGTTGCCAGTATGCTCATTGTGACACCTCAATCTTCCAACGGTCAGGGTCTAGTGAACGTAATTGATCTGCAAGGAAAGTTTGTAATCAATGTAACTATGAAAGGAAGTGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f67944976681d341d0d260f8c8da1949c0016628f07d620d30cd5663b029827
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6077
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome study of newly isolated Alicyclobacillus-specific phaga Shymialevich,D., Wojcicki,M., Srednicka,P. and Swider,O. 2023-06-20 — GenBank