Protein

View in Explore
Genbank accession
UAW59279.1 [GenBank]
Protein name
putative tail structure protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MADEIQSYKVVCSGGLNSNENHLFLSEAASGAATRLVNYEPSLYGGYRRVEGYSLLEGLDTEVGEGVAEGPVLAVAIYKNEHLGNPYIMAARKDVGANTYKFYKFISQVGWQAMTNSLTLNTTDGVRTVTKLRHAQFDFGDGSHIIFVDGVNNATIFDGINWYQLNSSGAGTSASPGGNQIVNAPAIVEVFENHIFLGGDRTARAVICHSAPTNPFDFTSASGGGQILPGFNVVQFKPFRDDLFVFGINQIKKVSPDITAGFVLDQVTANVGCVARDSVLEIGGDLIFLSPEGFRPVAGTSRIGDVEIQTLSKAIQVTLVNMIRQYDMDTINGVVIRGKSQVRFFVGDDTYTPTNSYGIIGGLAEQQGSIAWEFGELNGIRASCCTSDYIGREEFVLHGDYDGKVYRQEQGTSFNGDDITSVYATPYLDFGDTEVRKTMRKVNTFIRAEGPVELFLSMAYDWGDYNTQRPSSYSQESLGGPVEYGGLNIDYGGANILYGGNSKPIMTTDIQGSGFSARATFVTVGQSEPFSIQGLVFEFSISGRR
Physico‐chemical
properties
protein length:545 AA
molecular weight: 59069,20810 Da
isoelectric point:4,80371
aromaticity:0,11009
hydropathy:-0,13725

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UAW59279.1
1 545
Domain Start End Length (AA) Confidence
N-terminal 1 395 395 0,8677
Central domain 396 534 140 0,2269
C-terminal 535 545 10 0,5898
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-395
Central
396-534
C-terminal
535-545

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-738
[NCBI] 		2873409 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAW59279.1 [NCBI]
Genbank nucleotide accession
MZ892992 [NCBI]
CDS location
range 33078 -> 34715
strand -
CDS
ATGGCAGACGAAATCCAGAGCTATAAAGTAGTATGCTCAGGTGGTCTAAACAGTAACGAAAACCATTTGTTTTTGTCTGAGGCCGCATCAGGTGCCGCTACACGACTGGTAAATTATGAGCCTAGTCTATATGGTGGCTATCGTCGTGTAGAGGGCTATAGTTTATTAGAGGGGCTAGACACAGAAGTTGGCGAAGGTGTAGCTGAAGGTCCAGTACTAGCCGTAGCCATCTATAAGAACGAACACCTTGGTAATCCCTATATCATGGCTGCTCGTAAGGACGTAGGAGCTAATACCTACAAGTTCTATAAGTTTATATCTCAAGTAGGCTGGCAGGCGATGACTAACAGCCTGACACTGAATACGACTGACGGTGTTCGCACTGTAACCAAGTTACGACACGCACAGTTTGACTTCGGTGATGGCTCCCACATCATCTTCGTAGACGGGGTCAATAATGCCACAATCTTTGATGGGATAAACTGGTATCAGCTAAATTCTTCAGGTGCTGGTACATCTGCAAGCCCCGGAGGCAATCAGATAGTCAATGCCCCTGCTATTGTAGAAGTCTTCGAGAACCATATCTTTCTAGGCGGCGATAGAACTGCACGTGCTGTGATCTGTCACTCCGCTCCTACGAACCCTTTTGATTTTACGTCAGCTTCGGGCGGCGGTCAGATACTACCGGGATTTAATGTAGTCCAGTTTAAGCCCTTCCGCGACGACTTGTTTGTGTTTGGCATCAACCAAATTAAGAAAGTCAGCCCAGACATAACTGCAGGATTTGTACTAGATCAAGTTACAGCTAACGTAGGCTGCGTGGCACGGGACAGTGTTCTAGAAATCGGTGGCGATCTAATCTTCTTATCCCCAGAGGGCTTCCGTCCTGTCGCAGGTACATCCCGCATTGGTGACGTTGAAATCCAGACGCTATCAAAGGCTATTCAGGTTACACTGGTTAACATGATACGCCAGTACGACATGGACACAATAAATGGTGTTGTGATCCGTGGTAAGTCTCAGGTGCGTTTCTTTGTAGGTGATGACACTTATACCCCTACCAACTCCTACGGTATCATTGGCGGTCTAGCAGAACAGCAAGGATCAATTGCTTGGGAGTTTGGTGAACTAAACGGCATTCGGGCTTCTTGCTGTACTAGTGATTATATTGGTCGTGAGGAGTTTGTCCTACATGGAGACTATGACGGAAAAGTATACAGACAAGAGCAAGGGACCAGCTTTAACGGCGACGATATTACGTCAGTATATGCTACACCATATCTGGACTTTGGTGATACTGAAGTACGTAAGACAATGCGGAAGGTTAACACCTTCATTCGAGCAGAAGGTCCAGTAGAGCTATTCTTGTCTATGGCCTACGACTGGGGCGACTACAACACACAACGTCCCTCTAGTTATTCTCAAGAAAGCCTCGGCGGTCCTGTTGAATACGGTGGTCTTAATATTGACTATGGCGGTGCAAATATCCTGTACGGCGGTAACTCTAAGCCAATTATGACTACGGATATACAAGGTTCAGGTTTCTCGGCAAGGGCAACCTTTGTGACAGTGGGGCAGTCAGAACCTTTCTCCATCCAAGGCTTAGTATTTGAATTTTCTATTTCGGGAAGGCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
15c7d79bd643dc6687de139424f5112511b82cd7c26a0559bd57208d58eeb155
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8323
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly identified HMO-2011-type phages reveal genomic diversity and biogeographic pattern of marine HMO-2011-type group Qin,F., Du,S., Zhang,Z., Ying,H., Wu,Y., Yang,M. and Zhao,Y. 2022-01-12 — GenBank