Protein

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Genbank accession
XCO38170.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,51
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MADLKLGTTLGGAGIWSASNLPLLPSGGQLTYKGWRVYTENDRPTAEDINALSMINGGTVAKNTTFSQNLVVGASLTSNSIQSNSVLTIQRSANPAEMIFHRPDITATPSSESWVLNLYAKDGLNRGMGSLIISARSDGGNKVYLRANKDGSPNTSLTLDSQTQQVTVEQGSFRVIGTSNLGLTNATSMAVSGAITANTVTPSNWANHDERYITGIPRGMSGNSFGAAVVTEKNDVLSVGGNITDGPYGNTTYYGQVVNYRRTLNSGVSLVQTYYDITSTWIRAATGSPGAWSYSAGDANGWRRIYDTSLPPTPAEVGAVNKSGDAMTGVLTLANISQPLKTPGGGILANDGNVYINKSGFAGWIDALFLKNTGGTVTGTINQTGGYFDASGEGRGSWASQSTAKAPIFQNINTTSTSEYWPIIKQYYSQAGGAWSMGTLVNTNRFTVHYRTGSVDRQWYFDNSGEFVSYGDIISNSANGLRIAYNNRGFFIRNDGGNTYFMLTNSGDAWGSYNNLRPLYINNDTGNVSMGHTLSVNGRISQSSSYIDNGNLTLNGSGNGRVEFIRSGANPRDMYIFHAGDATRGNRIELSDSSSYLVYFERHPSSGVQLIMNGNGSFNDVYIRSDERLKSNFSKIENALDKVDLLDGMVYDKANHIGGEETTREAGLVAQQLQEVLPEAVKKGVDGEQNEILTVSSSAVIALLVNAIKELREEVRELKSR
Physico‐chemical
properties
protein length:721 AA
molecular weight: 77481,76360 Da
isoelectric point:5,92213
aromaticity:0,08738
hydropathy:-0,35673

Domains

Domains [InterPro]
DC_1248
STR
1–721
DC_1248
IPR048390
ATT
464–521
IPR048390 IPR030392 Coil
IPR030392
CHP
625–721
IPR030392
XCO38170.1
1 721
Architecture
STR
ATT
STR
STR 1-463 | ATT 464-521 | STR 522-721
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO38170.1
1 721
Domain Start End Length (AA) Confidence
N-terminal 1 151 151 0,3521
Central domain 152 366 216 0,3796
C-terminal 367 721 354 0,8267
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-151
Central
152-366
C-terminal
367-721

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146015
[NCBI] 		3232196 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38170.1 [NCBI]
Genbank nucleotide accession
PP889466 [NCBI]
CDS location
range 44021 -> 46186
strand +
CDS
ATGGCTGATTTGAAATTAGGTACAACGCTGGGTGGTGCGGGTATCTGGAGTGCTTCTAACCTTCCTCTATTGCCCTCTGGTGGACAATTAACGTATAAAGGGTGGAGAGTATACACAGAGAACGATCGCCCAACAGCAGAAGATATAAACGCACTGTCGATGATTAACGGAGGTACTGTTGCGAAGAATACTACGTTTAGTCAAAACTTGGTTGTTGGTGCTTCATTAACTTCTAACTCGATTCAATCTAATAGTGTTCTTACCATCCAACGTAGTGCAAACCCTGCGGAAATGATTTTCCATCGTCCTGATATTACGGCAACACCATCATCGGAATCGTGGGTTTTAAACCTGTATGCGAAAGATGGTTTAAATCGAGGTATGGGTTCTTTGATTATTTCTGCACGTAGTGACGGCGGAAATAAAGTATATCTACGGGCGAATAAAGACGGTTCCCCTAATACAAGTTTAACACTGGATTCACAAACCCAACAGGTAACAGTTGAGCAAGGTTCTTTCCGTGTAATCGGGACTTCTAACCTCGGCTTAACGAATGCTACATCAATGGCAGTTAGTGGCGCGATTACTGCGAATACAGTAACTCCGTCAAACTGGGCTAACCATGATGAACGTTATATCACGGGTATTCCTCGCGGTATGTCTGGAAACAGTTTCGGGGCTGCTGTTGTAACTGAAAAGAACGATGTTCTGTCAGTAGGCGGTAACATCACCGACGGCCCATATGGTAACACTACGTATTACGGGCAGGTTGTCAACTATCGCCGTACTCTGAATAGTGGTGTTTCTCTGGTTCAGACTTACTATGATATAACATCAACATGGATTCGTGCTGCGACGGGTTCTCCTGGTGCATGGTCTTATAGTGCGGGTGATGCTAATGGATGGAGAAGAATTTATGATACTTCGCTTCCTCCGACTCCGGCGGAAGTAGGGGCAGTCAATAAATCCGGTGATGCGATGACTGGTGTTCTAACACTGGCAAACATATCTCAACCACTTAAAACACCCGGCGGTGGTATTCTGGCTAATGACGGGAACGTGTATATCAACAAAAGCGGGTTTGCAGGATGGATCGATGCACTGTTCTTGAAAAATACAGGAGGCACGGTAACAGGAACCATCAACCAAACAGGCGGTTATTTTGATGCATCGGGGGAAGGTAGAGGTTCTTGGGCTTCTCAAAGCACTGCAAAAGCTCCGATTTTCCAGAATATTAACACTACATCGACATCTGAATACTGGCCTATTATTAAGCAATATTATTCTCAGGCTGGCGGTGCGTGGTCTATGGGTACGTTGGTAAACACCAACAGGTTTACAGTCCATTACCGTACTGGATCGGTAGATCGTCAATGGTATTTTGATAACTCTGGTGAGTTTGTATCTTATGGTGATATTATTTCCAACTCAGCCAACGGATTGCGTATTGCATACAATAACCGTGGATTCTTTATCCGAAATGACGGTGGTAACACCTATTTCATGTTAACAAACTCAGGTGATGCATGGGGAAGTTATAATAACCTACGTCCTTTGTATATAAATAATGATACTGGTAATGTCTCGATGGGACATACGTTATCAGTCAACGGACGTATCAGCCAGTCAAGCAGTTATATTGACAATGGAAATTTAACATTAAACGGTAGCGGCAACGGACGCGTTGAATTTATTCGCAGTGGTGCAAACCCTCGCGATATGTATATCTTCCATGCTGGTGATGCTACTCGCGGAAACCGTATAGAACTGTCGGATTCATCGTCGTATCTGGTTTATTTTGAGCGTCATCCGTCAAGTGGCGTTCAGTTGATAATGAACGGTAATGGTAGTTTTAACGATGTATATATTCGTTCTGATGAAAGACTGAAAAGTAATTTCAGTAAGATTGAAAATGCATTGGATAAAGTTGATTTACTTGATGGTATGGTGTACGACAAAGCAAATCACATTGGGGGTGAAGAAACTACCCGTGAGGCTGGTTTAGTCGCACAACAACTGCAAGAAGTATTACCGGAAGCCGTTAAGAAAGGTGTTGATGGTGAACAGAATGAGATCTTAACTGTTTCTTCTTCTGCTGTTATTGCATTGCTTGTCAACGCGATTAAAGAACTCCGTGAGGAAGTCAGGGAACTTAAATCCCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2bce150be04f7f7a229a4d313400e3a1aafa413a308b1a09a7ee13683654c8a5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6488
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank