Protein

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Genbank accession
ANJ65520.1 [GenBank]
Protein name
putative head completion protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPRVSVNVGNGFYQSNSLPLSNQRCVNLYPNLPQSQAISEDALFGTPGIKYVTDTGAPSVHTNRGAWVKDGVPYFVNGTRLFKLERTVTFGEEVLSEVFLGVIEGGNRCHFADNGTQLMILVPDSVSKGYIVDETQFPVVQEITDSDFYASGNPQAVAFIDSFFVVTTDQKRIIQSASGDGSSWNALDFGAAVVDPDEIVAPFVFRNQIFVGGKETFEVFENIGVSGFTFRRINGLVYDVGLASQYAITSDNNAFYWLGAEKASDVGIWASSGSGAQKISTVAIDAIIARLNPDEIPNAFAWAYGQDGNYFIGFTFQSITVVFDSVTGRWHERESRFKNELGVDVVTRCRYNSVVQAYGRILVGDSISGRIGELDRECYTEYSQPLVAAFSLAPFYNQGTSFSLTQAEVFMESGVGNSDKPDPEVRLRMSKDGKVFNFSLTRKIGKEGEYSKRQIWRQLGRFSRIAVAEISISDPVKRAFYTFEANIKGGRAIGN
Physico‐chemical
properties
protein length:495 AA
molecular weight: 54503,36670 Da
isoelectric point:5,09297
aromaticity:0,12323
hydropathy:-0,14020

Domains

Domains [InterPro]
DC_0229
STR
1–495
DC_0229
IPR021098
STR
7–487
IPR021098
ANJ65520.1
1 495
Architecture
STR
STR 1-495
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ANJ65520.1
1 495
Domain Start End Length (AA) Confidence
N-terminal 1 477 477 0,8939
Central domain 478 484 8 0,0008
C-terminal 485 495 10 0,9955
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-477
Central
478-484
C-terminal
485-495

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas virus vB_PspP-H6/1
[NCBI] 		1852626 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas sp. H6
[NCBI] 		1870778 Pseudomonadota > Gammaproteobacteria > Alteromonadales > Pseudoalteromonadaceae > Pseudoalteromonas >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANJ65520.1 [NCBI]
Genbank nucleotide accession
KX257490 [NCBI]
CDS location
range 8352 -> 9839
strand +
CDS
ATGCCACGCGTTTCTGTTAATGTCGGTAACGGCTTCTATCAATCAAATTCACTACCGTTGAGTAATCAGCGGTGTGTCAACTTATACCCAAACCTACCACAATCACAAGCCATTTCAGAAGATGCGCTATTCGGCACTCCTGGCATTAAATACGTAACCGATACCGGAGCACCATCAGTTCACACAAACCGTGGCGCATGGGTTAAAGATGGCGTGCCTTATTTCGTGAACGGAACTCGACTATTCAAGCTTGAGCGCACAGTAACTTTTGGCGAGGAAGTGTTAAGCGAAGTGTTCTTGGGCGTTATCGAAGGCGGTAACAGGTGCCACTTTGCTGATAATGGCACTCAATTAATGATATTAGTACCCGACTCAGTGAGTAAGGGCTATATCGTTGATGAAACACAATTCCCAGTAGTGCAAGAAATTACTGATTCAGACTTTTACGCCTCTGGAAATCCACAGGCAGTAGCATTCATTGACTCATTCTTTGTTGTGACAACTGACCAGAAACGGATTATACAAAGCGCTAGTGGTGATGGTAGCAGTTGGAATGCTTTAGACTTCGGGGCGGCAGTTGTTGACCCTGATGAAATCGTCGCGCCTTTCGTGTTCCGCAATCAGATATTCGTGGGAGGTAAAGAGACCTTCGAGGTGTTTGAAAATATCGGTGTATCTGGGTTTACATTTAGGCGTATTAACGGACTAGTCTATGATGTGGGATTAGCGTCACAGTACGCCATCACAAGCGACAATAATGCATTCTATTGGCTAGGTGCAGAGAAAGCCTCCGATGTTGGCATATGGGCTTCCAGCGGCTCTGGCGCACAAAAGATTTCAACCGTTGCTATCGATGCAATCATTGCCCGTTTAAACCCTGACGAGATACCAAATGCCTTTGCATGGGCGTATGGTCAAGATGGTAATTACTTCATCGGATTCACCTTCCAATCAATAACCGTGGTGTTTGACTCAGTAACAGGTAGATGGCACGAGAGAGAAAGCCGGTTTAAGAATGAATTAGGCGTTGATGTGGTTACACGGTGCCGTTACAACTCAGTCGTTCAGGCTTATGGGCGAATCCTTGTGGGCGATTCAATCAGTGGTCGCATAGGTGAGCTAGACCGTGAATGCTACACAGAATATAGCCAGCCATTAGTGGCGGCATTTAGCCTTGCGCCATTCTATAATCAGGGTACAAGTTTCAGCCTCACTCAAGCTGAGGTATTCATGGAATCTGGCGTGGGCAATTCCGATAAACCAGACCCCGAAGTAAGATTAAGAATGTCGAAAGATGGCAAGGTATTTAACTTCTCATTGACACGCAAAATAGGCAAAGAAGGCGAATACAGTAAGCGTCAAATATGGCGGCAGCTTGGCCGCTTTAGTCGTATTGCTGTAGCTGAAATAAGTATCAGCGACCCAGTTAAACGCGCTTTCTATACCTTTGAGGCGAACATTAAAGGAGGTAGGGCAATTGGCAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9570ecfe5b0028b33de30fbc07793120e037f5431f139ab23ee7df2cd1ccdc19
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8851
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pseudoalteromonas phage vB_PS-H6/1 that infects Pseudoalteromonas sp. Strain H6 Kallies,R. 2019-10 — GenBank