Protein

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Genbank accession
YP_794073.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MTKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVGLKLARRRASGGGSYALNPGVEIDSSLMVVDFPPKPLNFKATGGFGSVLLEWDMPNYRGHSLTEVWRGTEDDLADAVLVATTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWHAVGGVAAQTQISVQALIDQIKEEAANSPVVEELRQEIKDAEGRAVQEAGVQTTEVVGNLREETLKTIGGVETRITDMDSSTSESLNEVNERITKLDEGGSKAFLSMWSKKAGADGVTAGIGIVAGKDSSGGAVSQVAISASQLFVFDPNDPDNTAYPFAVSGGKVVITKAMISDAVIETLVSQKIVADEVKAGVSITSPVIRSAVIQNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVIRNDKIEVYDENGRLAVRIGRLS
Physico‐chemical
properties
protein length:422 AA
molecular weight: 44908,92560 Da
isoelectric point:5,01209
aromaticity:0,06161
hydropathy:-0,16445

Domains

Domains [InterPro]
DC_1230
STR
33–422
DC_1230
IPR053171
Unmapped
72–249
IPR053171 IPR015406
Coil
Unmapped
184–204
Coil
YP_794073.1
1 422
Architecture
STR
STR 33-422
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stx2-converting phage 86
[NCBI] 		379329 Uroviricota > Caudoviricetes > Sepvirinae > Traversvirus tv86 >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_794073.1 [NCBI]
Genbank nucleotide accession
NC_008464.1 [NCBI]
CDS location
range 22000 -> 23268
strand +
CDS
ATGACAAAAAAACCGTGGCGCGCAGGGAAGGATTTATCTGCGGTTGTGGAAAATATGGAGATTGGCACAGGGCAGCGTGGTGACGGACGTCACGCCTTTGTGACCCGTGAAGAACTGGTTGGTCTGAAGCTGGCTCGTCGTCGTGCTTCTGGTGGTGGCTCATACGCCCTGAATCCGGGGGTAGAGATAGACAGTAGCCTGATGGTTGTGGATTTCCCCCCGAAGCCGCTGAATTTTAAAGCGACAGGTGGATTTGGCTCGGTTCTCCTTGAGTGGGATATGCCCAATTATCGAGGTCATTCACTGACTGAAGTCTGGCGGGGTACGGAAGACGACCTTGCTGATGCCGTGCTGGTTGCCACCACACCGGGGCAGGTTTACGGCGATCCGGTTGACCCGGGATGGTCGGGATTTTACTGGATCAGGTTTGTGAATGCTGCTGGCGTTAAAGGACCGTGGCATGCTGTCGGTGGTGTTGCTGCACAGACACAAATTTCTGTTCAGGCGCTGATTGACCAGATCAAGGAAGAAGCGGCGAATTCTCCTGTTGTGGAGGAGTTACGGCAGGAAATTAAGGATGCCGAAGGGCGGGCAGTACAGGAAGCTGGCGTGCAGACCACTGAGGTTGTGGGTAATCTCAGGGAGGAGACATTAAAAACGATTGGTGGCGTGGAAACCCGCATAACCGATATGGACTCATCAACAAGTGAATCGCTAAATGAAGTTAATGAGCGAATCACTAAACTGGATGAAGGAGGCAGTAAAGCTTTCCTGTCCATGTGGTCAAAGAAAGCCGGAGCTGATGGGGTGACAGCCGGAATCGGCATTGTTGCCGGAAAAGACAGCAGCGGAGGTGCGGTAAGTCAGGTGGCAATATCCGCGTCGCAGTTGTTTGTCTTTGACCCGAACGATCCTGATAACACGGCCTATCCGTTTGCAGTTTCTGGCGGAAAAGTCGTGATTACTAAAGCGATGATTTCTGACGCGGTGATTGAAACGCTTGTATCGCAGAAAATTGTCGCGGATGAAGTAAAGGCCGGGGTAAGTATCACCTCGCCGGTGATTCGCAGTGCTGTTATTCAGAACGGGAACTTTCAGGTTGATTCTCAGGGTAATCTGAATATTGGTGGCCTTTTTAGTGTTACTTCTCAGGGGCAACTGACCATTCGTTACTCTAATCAGAATGTGGGGCTGGTGATCCGCAATGATAAAATTGAAGTTTATGATGAAAACGGAAGACTGGCTGTACGAATCGGAAGATTGAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
93033b769718d1290656854dfaab7a017178e59123f710f8ec02235f534a9401
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7178
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Stx2 phage of enterohemorrhagic Escherichia coli serotype O86:H- strain DIJ1 Yamamoto,T. 1997 — GenBank