Protein
View in Explore- Genbank accession
- XKC24951.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MKKLLAAGLLSLGLVGCATTSGLAPKVTTSGFDGSKRVFIDGHSVACDQMVCPLIGAIWLSNNPNLVGLKISVINSIVSINSVDLNIDGEIIKLRENTLTDFSTGTLLESSKVFVTDLTVVDKILNSKRAWIRVNTSKGLIENPIIDGSKDSKAYHALKRFKDQVNTVK
- Physico‐chemical
properties -
protein length: 169 AA molecular weight: 18142,89570 Da isoelectric point: 9,19527 aromaticity: 0,04734 hydropathy: 0,17811
Domains
Domains [InterPro]
PS51257
STR
1–17
STR
1–17
1
169
Architecture
STR 1-17 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
169
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 84 | 84 | 0,1312 |
| Central domain | 85 | 158 | 75 | 0,4696 |
| C-terminal | 159 | 169 | 10 | 0,5989 |
Note: Constraints were applied during segmentation.
Fixed 79 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 79 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-84
1-84
Central
85-158
85-158
C-terminal
159-169
159-169
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage phi5013-M1 [NCBI] |
3374944 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Acinetobacter baumannii [NCBI] |
470 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XKC24951.1
[NCBI]
Genbank nucleotide accession
PQ432284
[NCBI]
CDS location
range 4788 -> 5297
strand +
strand +
CDS
ATGAAAAAATTATTGGCTGCGGGTCTATTAAGTCTTGGATTAGTGGGGTGCGCTACAACATCTGGGTTGGCACCTAAAGTAACTACAAGTGGATTTGATGGATCAAAAAGAGTTTTTATTGATGGGCATAGTGTTGCATGTGATCAAATGGTTTGTCCTTTAATAGGCGCGATTTGGTTAAGCAATAACCCGAATCTTGTAGGGTTAAAGATATCAGTTATAAATTCAATCGTTTCTATAAACTCTGTTGATTTGAATATTGATGGAGAAATAATCAAATTAAGAGAAAACACTTTAACGGATTTTTCAACTGGTACTTTATTGGAGTCTAGCAAAGTATTTGTTACTGATTTAACCGTAGTGGATAAAATTCTTAATTCAAAAAGAGCTTGGATTCGAGTTAATACTAGCAAGGGACTAATCGAAAATCCGATTATTGATGGTTCTAAGGATAGTAAGGCTTACCACGCATTAAAACGCTTTAAAGATCAAGTAAATACTGTTAAGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
f4829e9ccc15a990eacfedf49e3668e91bc2406c2749e6bc355f5d6f9caab548
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50