Protein

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Genbank accession
AUR83581.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MGNITIKGVLKDPSDQVAVNVPVLIISKVGYGDTLFSSQVTRKTDATGSYDFPLVYGTHSIAVRFYDQFVTLGTVVVNSSSTAEMTINELLELSSTEPPTPDWVVRIEHLTTEATAAAAKAENEADRAAAQVPLAKDQVTLAANEVVKATSQADRAKSEADRATQVTGLDTVEQAVDHALSEFAGLMTESEARATQWQNENVNFDASGVVNAGKQDANKATNVNEGLYVYQTGGNENSIKLGRRDDRVNAGSSKTWFPVTHIAGSVVNILSMGVDGSQGYQAGAFELPQAPDGTVIYDSTGDARGSGKASLDLKFDVDPKYGDVAADTNEAVARAFEGMITNGDFRNGAANWSAPSDNRGTLTFESDGCVVSDTSGQSALSGSMYLDNTAFNTRDGESYIVEVNVLSMSGEGGVASNYAIRLGGYQDTNQIRPAIKLGHNKFKFTAAKDATDAFLIYVGRNLSMKLGSVSIRVASEVVVTHPVDLVMLEYYEEELTGRVEIMECLGSTATTFGTTSVPTVLSTRKLSYFQQYDGQFDEVRINPDFINDRYRCVVWDDLTEPQKREIAAYMGERLFKGVNGFPVNGRLRARTFRGPGNGDWNLVNDWSSSFNYLQFNTNSRPAPQGVRDAVDAWTGASTSANYSQGGASNQRGDYDQEGLYNARHATPNYYAYRGNCYAYVVATVPRANQGAYHPDLNPWGCGKFANSSDGATVDGDDFWYEDLIGKMRPTTVKDCFPVHKYGGVATSAGVYAKSNGDLSGSIAAGFSGHPDGIFYDGIEAGGLNGVIDRRLPAEEMQSQWLYAERKHECAKYRGVEVLADNTSVSGKFMHTYKETVGGSITLPRTCLDSTVECVHSSDGGSTWTKTSPSVNQSNNTVTLPVGGESVVSFHTYAKQTVPSTNAPVVSGTFGLGPVMVQNSSDIKKGALLRESVTGVISTGTEYTNLGILRSTIVDELVIDYETMTYTPEAGGAQLQSQLVEENGQLFIQYHDGTNYHRSAIPIGWADQRARVGGENAPA
Physico‐chemical
properties
protein length:1018 AA
molecular weight: 109609,73450 Da
isoelectric point:4,88272
aromaticity:0,08841
hydropathy:-0,35904

Domains

Domains [InterPro]
IPR013784
STR
3–86
IPR013784 Coil Coil
DC_1387
STR
8–1017
DC_1387
AUR83581.1
1 1018
Architecture
STR
STR 3-1017 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR83581.1
1 1018
Domain Start End Length (AA) Confidence
N-terminal 1 485 485 0,6672
Central domain 486 802 318 0,9063
C-terminal 803 1018 215 0,6476
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-485
Central
486-802
C-terminal
803-1018

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.037.O._10N.261.52.F7
[NCBI] 		1881297 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR83581.1 [NCBI]
Genbank nucleotide accession
MG592421 [NCBI]
CDS location
range 19454 -> 22510
strand +
CDS
ATGGGAAATATAACAATTAAAGGTGTACTTAAGGACCCGTCTGACCAAGTTGCAGTCAATGTCCCGGTACTAATCATCAGTAAGGTAGGGTACGGTGACACCCTCTTTAGTTCACAAGTTACACGTAAAACAGACGCTACAGGTAGTTACGACTTCCCTCTGGTTTATGGTACTCACAGCATTGCTGTACGCTTCTATGACCAGTTCGTTACGTTAGGTACTGTCGTTGTCAACTCTTCGTCTACAGCTGAGATGACCATTAATGAGCTGTTAGAACTGTCGTCTACGGAACCACCGACACCAGATTGGGTTGTACGTATTGAACACCTCACCACTGAGGCCACGGCCGCTGCCGCTAAAGCTGAGAATGAAGCTGACCGTGCTGCTGCTCAAGTACCTCTGGCTAAAGACCAAGTCACTCTTGCTGCTAATGAGGTAGTTAAGGCAACCAGTCAAGCTGACCGAGCCAAGTCTGAAGCTGACCGCGCTACTCAGGTGACAGGTCTTGATACCGTTGAGCAAGCTGTCGACCACGCTTTGTCTGAGTTTGCTGGACTGATGACCGAATCAGAAGCTCGGGCAACCCAGTGGCAGAACGAGAACGTCAACTTCGATGCTAGTGGGGTGGTGAATGCAGGTAAGCAGGATGCCAATAAAGCAACCAACGTCAACGAAGGTTTGTACGTATACCAAACAGGTGGCAATGAGAACTCAATAAAATTAGGTAGGCGAGACGACAGAGTAAATGCTGGGTCATCTAAAACTTGGTTCCCTGTAACACACATCGCAGGTTCTGTGGTTAACATACTGAGTATGGGGGTTGATGGATCTCAAGGGTATCAAGCAGGTGCCTTTGAGCTACCACAAGCCCCAGACGGCACAGTTATTTACGACTCAACAGGTGATGCGCGTGGTAGTGGCAAAGCAAGCCTAGACCTAAAGTTTGATGTTGACCCTAAGTATGGTGATGTTGCTGCGGATACTAATGAAGCGGTAGCAAGGGCTTTTGAGGGAATGATTACCAATGGTGATTTCAGAAACGGTGCTGCCAACTGGAGTGCGCCATCTGATAATCGTGGGACTCTTACCTTTGAAAGTGATGGCTGTGTGGTATCCGACACTTCAGGGCAGTCCGCACTTTCTGGCTCGATGTATCTTGACAATACAGCATTCAATACTAGAGATGGTGAAAGCTATATCGTAGAGGTAAATGTTCTTTCAATGTCAGGTGAGGGAGGGGTCGCAAGTAACTATGCAATCCGCTTAGGTGGTTATCAGGACACAAACCAGATACGCCCTGCTATTAAGTTAGGCCATAACAAATTCAAATTCACTGCTGCAAAAGACGCAACTGATGCATTTTTGATTTATGTCGGAAGAAACTTAAGCATGAAGTTGGGTAGCGTATCCATAAGAGTTGCATCCGAAGTAGTGGTAACACACCCTGTAGACCTAGTAATGCTCGAATACTACGAAGAAGAATTAACTGGTCGTGTTGAAATCATGGAGTGCTTAGGTTCAACCGCAACCACTTTCGGCACCACTAGCGTCCCTACCGTTCTGTCTACTCGTAAGCTGTCTTACTTCCAACAGTATGACGGTCAGTTTGATGAAGTGAGAATTAACCCTGACTTCATCAATGACCGTTATCGTTGTGTTGTTTGGGATGACTTAACTGAACCCCAGAAGCGTGAGATTGCTGCTTACATGGGTGAGCGACTGTTTAAAGGTGTGAATGGGTTCCCTGTTAATGGTCGTCTACGTGCGCGTACTTTCCGTGGTCCGGGTAATGGTGATTGGAATCTTGTTAATGATTGGTCTAGTAGCTTTAATTATCTACAGTTCAACACAAATTCAAGACCAGCTCCTCAAGGCGTTAGGGATGCAGTTGACGCGTGGACTGGTGCATCAACATCGGCTAACTACTCACAAGGCGGGGCTTCAAACCAGCGCGGAGACTACGACCAAGAAGGTCTGTATAACGCTAGACACGCAACACCAAATTATTACGCATATCGTGGTAACTGCTACGCCTACGTAGTAGCAACAGTACCTAGAGCGAACCAAGGTGCTTATCATCCTGATTTGAATCCTTGGGGTTGTGGTAAATTTGCAAATAGTTCCGATGGTGCAACGGTGGATGGTGACGATTTCTGGTACGAAGACCTGATTGGCAAAATGCGCCCAACCACCGTGAAAGACTGCTTTCCAGTACATAAGTACGGTGGTGTTGCAACTTCCGCAGGCGTGTACGCTAAAAGCAATGGAGACCTTTCAGGCTCAATTGCGGCGGGATTCTCAGGTCACCCAGACGGTATTTTCTACGATGGTATCGAAGCAGGTGGTTTGAATGGCGTTATTGACCGCCGCTTACCTGCTGAAGAAATGCAAAGCCAGTGGTTGTATGCTGAACGTAAGCATGAGTGCGCTAAGTATCGTGGTGTTGAAGTTCTTGCAGATAACACCAGTGTATCCGGTAAGTTCATGCACACGTACAAAGAGACGGTCGGTGGTTCAATCACACTACCTAGAACGTGCTTAGATTCTACGGTTGAATGTGTTCACTCTTCAGATGGTGGTTCAACATGGACTAAGACTAGCCCATCGGTCAACCAGTCTAATAATACTGTCACACTTCCTGTTGGTGGTGAGAGTGTTGTTTCATTCCACACCTACGCAAAACAAACAGTACCATCGACAAACGCACCTGTTGTTAGCGGTACTTTCGGGCTTGGTCCTGTGATGGTTCAGAATAGCTCAGACATTAAGAAAGGTGCACTGCTACGTGAGTCGGTAACAGGTGTTATCTCAACTGGTACTGAGTACACTAATTTAGGTATTCTACGCAGTACCATTGTTGACGAGTTGGTTATCGACTACGAAACAATGACGTACACACCTGAAGCGGGTGGTGCTCAATTGCAGTCGCAACTTGTTGAAGAAAACGGTCAGCTGTTCATTCAGTACCATGATGGAACCAACTACCACCGTAGTGCTATTCCTATCGGATGGGCTGACCAGCGTGCTCGTGTTGGTGGCGAGAATGCACCTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c68b77893977eb008af80ef774d7b2d169c889fecf56d8aa94a13de89012187
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3845
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank