Protein

View in Explore
Genbank accession
YP_009056524.1 [GenBank]
Protein name
DNA polymerase
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MALEFMEVVAKTYGDLERLVKAKMLEGWMPFDSLINNRFTIAIVMVKGSDAQLTDFRILGDSTRVKLISKANKLIADDPEWEVFGHPQIFGADDYIVSLSKGFKGTTGRDGMAGPQGPQGPRGEVGPQGPQGEKGDTGPQGLKGDKGDKGDPGALVT
Physico‐chemical
properties
protein length:157 AA
molecular weight: 16794,93450 Da
isoelectric point:5,19937
aromaticity:0,07006
hydropathy:-0,38662

Domains

Domains [InterPro]
DC_1122
ATT
2–110
DC_1122 IPR008160
IPR050392
Unmapped
101–153
IPR050392
IPR008160
STR
102–153
IPR008160
YP_009056524.1
1 157
Architecture
ATT
STR
ATT 2-110 | STR 111-153 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_AHP42
[NCBI] 		1416028 Uroviricota > Caudoviricetes > Drexlerviridae > Rogunavirus > Rogunavirus AHP42
Host Escherichia coli O157:H7
[NCBI] 		83334 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009056524.1 [NCBI]
Genbank nucleotide accession
NC_024793 [NCBI]
CDS location
range 6392 -> 6865
strand +
CDS
ATGGCTTTAGAGTTTATGGAAGTTGTAGCTAAGACTTACGGCGACCTGGAGAGGTTAGTAAAGGCAAAAATGCTGGAAGGATGGATGCCATTTGATAGCTTAATTAACAATAGATTTACTATCGCAATTGTTATGGTTAAGGGTAGTGATGCGCAGCTTACCGACTTTAGGATTCTCGGTGATAGCACTAGAGTTAAATTAATAAGCAAGGCTAACAAATTAATTGCTGATGACCCTGAGTGGGAGGTTTTCGGTCACCCTCAAATATTTGGCGCTGACGATTACATAGTTTCATTATCAAAAGGCTTTAAGGGAACTACTGGTAGGGATGGCATGGCTGGCCCACAAGGACCGCAAGGACCGCGCGGCGAAGTTGGCCCACAAGGTCCGCAGGGTGAAAAAGGAGATACTGGACCTCAGGGACTAAAAGGTGATAAAGGTGATAAGGGTGATCCAGGAGCGCTCGTAACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
51549f16490c5f45664fb455229b3ad9e4318e9cca2d1b1eb056e2c6886c48d6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6874
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50