Protein

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Genbank accession
ALO80451.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MCKKTGCKEDLTVLNIKYSGQPLTCISIEEGNNLQTTFEKINDVICSLKNNINNSLTIKSIGSGLALYGGKNEQDEHQIKTIKQGPGIQISSTENAITISKTNLETRLSYDISTNTLSSTYTDGTTKSTIIDFSETLTTLNFDEITKVLTYVGEDGLAKTINLSAVFSETLTTLEEVAGDIVYTDEIGNETLVTLPKSTSDLTNDGEDGLNPFVISGSNVSLFVNDSGYLTSYTETDPVFEASPASSITSQDITNWNSSSSVPADQTIIDGSTNSVAGGPVFNALEDKLNIGFTDVGNTLVDIRSSFGFKFQETGSFTGLIIAGNSFSLTAGEDDNSEITSLFLDSVSLASTVTNQQIIDKGETSLVTLGLADARYAAIGSGGGIVDFDDVPTDGSIKAVRSNGVFDALAAKVNSTGAKTITGQTIFTDSASFNSGVFVQSGGAFVSQGAFSLQGISTETYLDIQNGLIVRDENLVNKYTFQNDGSATISTDVLTKGEADSTYALIGSGGSGTVDQTIIDGSSSAVSGNAVFDGLALKPNLAGTNNFTGTAYWTGNVFANVLSSRYHQVTNTPLPTNTDNGSSSSGVLRAGDQNGEMVWLGHTAAMIFDNSLITSARTYTMPNKSGTVAMTSDIVENTSGTWTPVVTTTGSASYTYNTSVTGGIWTKVGKTVTFKCTVVINSKSGTPTGSALQITGFPFASKTIGGYSAVNPVPIHHTKFLDVTGTVTGALSGSTFLFFQPDLSNAGEILPVNYSALRGSASGALTLYGTIIVD
Physico‐chemical
properties
protein length:774 AA
molecular weight: 80978,49830 Da
isoelectric point:4,37174
aromaticity:0,07623
hydropathy:-0,05207

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALO80451.1
1 774
Domain Start End Length (AA) Confidence
N-terminal 1 441 441 0,9890
Central domain 442 640 200 0,1639
C-terminal 641 774 133 0,9983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-441
Central
442-640
C-terminal
641-774

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi17:2_18
[NCBI] 		1747283 Uroviricota > Caudoviricetes > Lightbulbvirus >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALO80451.1 [NCBI]
Genbank nucleotide accession
KT962247 [NCBI]
CDS location
range 52863 -> 55187
strand -
CDS
ATGTGTAAAAAAACAGGATGTAAAGAAGATTTAACTGTACTTAATATCAAGTACAGTGGACAGCCTTTAACATGCATTTCAATAGAAGAAGGGAACAACTTACAAACTACTTTTGAAAAAATAAATGATGTTATATGTTCATTAAAAAATAATATAAATAATAGTTTGACTATAAAATCAATAGGGTCAGGATTAGCTTTATATGGAGGGAAAAATGAGCAAGATGAGCACCAAATAAAAACTATAAAACAAGGGCCAGGAATACAGATTTCAAGTACTGAGAATGCTATTACAATAAGTAAGACTAATTTAGAAACTAGATTGTCTTATGATATTAGTACTAACACTTTAAGTTCTACTTATACTGACGGGACAACTAAATCTACAATAATAGATTTTTCTGAGACTTTAACCACTTTAAATTTTGACGAAATAACTAAGGTCTTAACTTATGTGGGGGAAGATGGCTTAGCAAAAACTATAAATTTATCAGCAGTTTTTTCTGAAACACTAACTACTTTAGAAGAAGTAGCAGGAGATATAGTTTATACTGATGAAATTGGAAACGAGACTCTTGTGACTCTCCCTAAAAGTACAAGTGATTTAACTAATGATGGAGAAGACGGCCTTAATCCTTTTGTAATCTCAGGAAGTAATGTTTCATTATTTGTGAATGACTCTGGATACCTTACAAGCTACACAGAGACAGACCCTGTTTTTGAAGCTTCTCCTGCATCAAGTATCACAAGTCAAGACATAACAAACTGGAACTCCTCTTCAAGTGTACCAGCAGATCAAACTATTATAGACGGAAGTACTAATTCAGTAGCAGGAGGACCAGTATTTAACGCCTTGGAAGATAAATTAAATATAGGATTTACAGACGTAGGTAATACCTTAGTTGATATCAGATCCTCTTTTGGATTTAAGTTCCAAGAAACAGGTAGCTTTACTGGATTAATAATAGCAGGTAATTCTTTTTCTTTAACAGCAGGAGAGGACGACAACTCAGAAATAACTTCATTGTTTTTAGATTCTGTTAGTTTGGCCTCTACTGTAACAAACCAACAGATTATAGATAAAGGAGAAACATCTCTTGTAACTTTAGGACTTGCTGATGCTAGATATGCTGCTATCGGTTCTGGAGGAGGTATTGTTGATTTTGATGATGTCCCTACAGATGGCAGCATTAAGGCCGTAAGAAGTAACGGAGTATTTGATGCATTAGCTGCTAAAGTTAACAGTACAGGAGCAAAAACTATAACAGGCCAAACAATATTTACGGACAGTGCAAGTTTCAATTCTGGAGTATTTGTGCAAAGTGGAGGAGCCTTTGTAAGTCAAGGGGCTTTTAGCCTTCAAGGGATATCAACTGAAACATACCTAGATATTCAAAATGGTCTTATCGTAAGAGATGAGAACCTAGTAAATAAATATACTTTTCAAAATGATGGCTCAGCTACGATAAGTACAGACGTGTTAACTAAAGGAGAAGCTGATTCTACATATGCCCTTATTGGCTCAGGAGGTAGTGGTACAGTAGACCAAACAATTATAGATGGTTCAAGTAGCGCTGTAAGTGGTAATGCTGTTTTTGATGGTCTTGCACTTAAACCTAATTTAGCAGGAACTAACAACTTTACTGGTACGGCTTATTGGACTGGTAATGTATTTGCAAACGTACTATCATCTAGGTATCACCAAGTAACAAATACACCTTTACCAACAAATACAGACAACGGAAGTAGCTCTAGTGGAGTATTAAGAGCAGGAGATCAAAATGGAGAAATGGTTTGGTTAGGGCATACAGCTGCAATGATTTTTGATAATAGCCTTATTACTTCAGCAAGAACATACACAATGCCTAATAAGTCAGGAACTGTAGCAATGACTAGTGATATAGTAGAAAATACGTCAGGTACATGGACACCAGTTGTTACAACAACAGGTTCTGCTAGCTATACTTACAATACATCAGTTACAGGAGGTATCTGGACTAAAGTAGGTAAGACTGTTACGTTTAAATGCACTGTAGTTATCAATAGTAAATCAGGAACTCCAACTGGTTCTGCGTTACAAATTACAGGCTTTCCTTTTGCATCAAAAACAATAGGAGGTTATAGTGCAGTAAACCCTGTTCCAATTCATCACACAAAATTTCTTGATGTAACAGGAACAGTTACAGGAGCTTTATCGGGATCAACATTTTTATTTTTCCAACCTGATTTATCGAATGCAGGAGAAATACTACCTGTTAACTATTCAGCATTAAGAGGATCGGCAAGTGGTGCTTTAACTTTATATGGAACAATAATAGTAGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b30fa47ff268f1c5d43f224b21d9bbe3b49701b92b531341b1396d508d298c32
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large-scale maps of variable infection efficiencies in aquatic Bacteriodetes phage-host model systems Holmfeldt,K., Solonenko,N., Howard-Varona,C., Moreno,M., Malmstrom,R.R., Blow,M.J. and Sullivan,M.B. 2016-06-27 — GenBank