Protein

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Genbank accession
QBQ72708.1 [GenBank]
Protein name
putative structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQSLNQKTVNNFVKGLITEAAELTFPDGASVDELNCDLRRDGSRRRREGVALEDSYTLSSFTITNDELVNTGNWVNVGGNASLEFLVIQKGNSLYFYNKADLPYSSQAESFSVSLASYEFSGSIGANNAKCQFASINGTLVVSSEAINTIVITYTGSNITVASIAFKTRDFEWQGNVDDYSEADATPSAERTYDAKNTGWGQSGGPADFTKPLTHPWYAGKDSDGNYDSAEWDKVFAGTTLTGNGHFILDFFNKVRSGLTTETETSRFKSVASFSGRVFYAGLTSAKNAGTILFSRLVEDEADLGKCYQQNDPTAEYLSDLVATDGGFINIPDAVNIQLLYPFRSSLFVFAENGVWQITGVDGIFSATAYGVNRVSNIGLLNPQAFVQAEGLPFWWSRFGIHTLTIDEVSGQGSEQNITISTIQSFWDRISTTAKSKVTSIYDSINKKIYWAYPDNDETIESKLNNILILDLTLSAFYPWKISDQTSNTSSVVGLSFYSGFGATELALDVITSAGDDVVTSAGDDVINTQISDFTTGDPALVLLVRDGATNKLTMAKFSDAGFLDWGDTDYTSFAETGYDFIGDLIVKKNAPYIAVYSRLTEQGFTGNEVDGYESIRPSSLLVSTAWDFNSNFGSPQEAYRFKHPIVVDPDNLSNFNYPEDVIITRLKVRGHGRSMRIKYESTQGKDFILLGWGLVQGRNNRF
Physico‐chemical
properties
protein length:704 AA
molecular weight: 77286,52310 Da
isoelectric point:4,57477
aromaticity:0,12074
hydropathy:-0,23722

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ72708.1
1 704
Domain Start End Length (AA) Confidence
N-terminal 1 169 169 0,6817
Central domain 170 380 212 0,3935
C-terminal 381 704 323 0,3372
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-169
Central
170-380
C-terminal
381-704

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-5
[NCBI] 		2559284 Uroviricota > Caudoviricetes > Zobellviridae > Veravirus >
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72708.1 [NCBI]
Genbank nucleotide accession
MK613347 [NCBI]
CDS location
range 24342 -> 26456
strand -
CDS
ATGCCACAGAGCTTAAACCAAAAGACAGTTAATAACTTTGTCAAGGGTCTTATTACTGAGGCTGCTGAGTTAACATTCCCTGACGGTGCTTCCGTTGATGAGCTTAACTGTGACCTTCGGCGTGATGGTTCCAGACGCAGGCGTGAGGGTGTAGCCTTAGAAGATAGCTATACTTTGTCATCGTTCACAATTACGAATGACGAATTGGTTAACACAGGGAACTGGGTAAACGTAGGTGGTAACGCCTCCCTTGAGTTCTTGGTCATCCAAAAAGGTAATAGCCTGTACTTCTATAACAAGGCTGACCTGCCGTATTCCTCTCAGGCAGAGAGCTTTAGTGTTAGCTTGGCTTCTTATGAGTTCTCTGGTTCTATTGGTGCTAACAACGCCAAGTGTCAGTTCGCAAGCATCAACGGCACACTTGTGGTCTCCTCAGAGGCTATCAACACCATTGTTATTACATATACTGGTTCTAACATAACAGTAGCTTCTATCGCCTTTAAGACACGTGACTTTGAGTGGCAGGGTAATGTAGACGACTACTCAGAAGCAGATGCAACTCCATCGGCTGAACGTACTTATGACGCAAAGAATACAGGCTGGGGTCAAAGCGGTGGTCCTGCTGACTTTACCAAACCTCTGACTCACCCTTGGTACGCAGGTAAAGACTCTGATGGTAACTATGACTCAGCAGAATGGGACAAGGTTTTTGCGGGTACTACACTAACAGGTAATGGTCACTTCATTCTTGACTTCTTTAACAAGGTCCGTAGTGGTTTAACAACAGAGACAGAAACATCACGATTCAAGTCTGTGGCTTCTTTCTCAGGCCGTGTGTTCTACGCAGGTCTTACCAGTGCTAAGAATGCAGGTACAATTCTCTTCTCCCGTTTGGTGGAGGACGAAGCAGACCTAGGTAAGTGTTACCAACAGAATGACCCTACCGCTGAATACTTGTCAGACCTAGTGGCTACTGATGGTGGTTTTATTAACATCCCCGATGCAGTTAACATTCAGTTACTCTACCCTTTCCGTTCTTCTCTCTTTGTCTTCGCAGAGAATGGCGTATGGCAGATCACAGGTGTAGATGGTATCTTCTCAGCTACAGCCTACGGTGTTAACCGTGTGTCTAACATAGGTCTCCTTAACCCTCAGGCTTTCGTTCAGGCTGAGGGTCTTCCTTTTTGGTGGTCTCGTTTTGGTATTCATACGCTTACCATTGATGAGGTGTCAGGACAGGGTTCGGAACAGAACATAACGATCTCTACTATCCAAAGTTTCTGGGATAGGATATCTACTACAGCTAAATCTAAAGTAACAAGTATCTACGATAGTATCAACAAGAAGATCTACTGGGCTTACCCTGACAACGATGAGACTATTGAGTCTAAGCTAAACAACATCCTTATCCTTGACCTTACTCTGTCGGCATTCTACCCTTGGAAGATCTCTGACCAAACGTCCAACACAAGCTCTGTTGTTGGTTTGTCATTCTACTCAGGCTTTGGTGCCACGGAACTTGCCCTAGATGTCATTACTTCTGCTGGTGACGATGTTGTAACATCCGCAGGTGATGACGTTATTAACACTCAGATCTCAGACTTTACCACAGGTGACCCAGCCCTTGTGTTGTTGGTTCGTGATGGTGCTACTAACAAGTTGACCATGGCTAAGTTCTCAGACGCAGGGTTCCTAGACTGGGGTGACACCGACTACACATCCTTTGCTGAGACAGGTTATGACTTCATTGGTGACTTGATCGTTAAGAAGAACGCACCTTATATTGCTGTGTACTCACGCTTGACAGAGCAGGGCTTTACTGGTAACGAGGTGGATGGGTACGAATCAATCAGACCATCCTCATTACTTGTGTCAACAGCATGGGACTTCAACTCTAACTTTGGCTCTCCTCAAGAAGCCTACAGGTTTAAGCACCCCATCGTTGTAGACCCTGACAACTTGTCAAACTTTAATTACCCTGAGGACGTTATCATAACTAGGCTTAAAGTCAGAGGCCATGGTCGCTCCATGCGGATTAAGTATGAGAGCACCCAAGGCAAAGACTTTATTCTCCTAGGCTGGGGTCTGGTCCAAGGAAGAAACAACAGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b9317191f9fab1b42028ed8596ec13bd7befc81c68521d705ceda4bc20804997
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7263
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank