Protein

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Genbank accession
YP_009608993.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLELLIGLGRKQGAADDSDVPFPAGTPFKGVVPSSSFISGPSLASAIGLSAGGALNNTPGWLHFIEANGLELYIAKKPLRYAATAEQINQALGNGSKEVTINGDVYICRNMTGAISSGAAAVPSNAGGEWNRYMYNVYDQTDRAGIPDALLWGNYTKAMLGIAQAPAGTNDLGDGVFTICAESVTNGFLLRGNDWQSASGGGQHIKGIWNMPANNPQTYYGWRPILIKKSTLPPSVFRGEVAPADLITGPALVAAVGVTTGAAFEDGNPTWLKFDENGKVFYIAKKPLRTGVTWEILNGFGAVYGSKIITIGNKRYRVRLMTGGTSDPMTTGGGEYDAYFSRCTQFYSGVASDRFASYTGPDVGWVSGTGNGQLCLVQEYYSTSGPGTRGYPGFLGVWYQIANTTHAGYAWRPVLEELPPAPTLSDTWAQIATLPAGVNGASACVIGDKMYVFGGQDAAFVVKGTLYEVNLTTGEVLTKASDLPRRYHQAVNIGGKMYVYGGYTSAYTGDVRIYDPATNLWTGGLSGVNSDRHASFAYNNKMYILGGNGGSQLTQARTYTPAGNTWTNYTATGVAAAPCYLGSADVSDNTAYTLTGYNTQKEFRSINLLTNVGKTMPAPPHGVYGHAHGSMKGGIYVFGGTVDTANKDKVTLRYDIVTGVWSYLGAIPYTIGERAASAQDGTNIYLAGGVGSPTAVWRYTP
Physico‐chemical
properties
protein length:701 AA
molecular weight: 74237,41600 Da
isoelectric point:7,55375
aromaticity:0,11270
hydropathy:-0,14608

Domains

Domains [InterPro]
DC_0860
STR
24–236
DC_0860 IPR015915 IPR015915
DC_0638
ATT
175–452
DC_0638 IPR006652
IPR011043
STR
425–691
IPR011043
IPR052637
Unmapped
429–596
IPR052637
PF24681
STR
433–596
PF24681
YP_009608993.1
1 701
Architecture
STR
ATT
STR
STR 24-174 | ATT 175-452 | STR 453-701
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009608993.1
1 701
Domain Start End Length (AA) Confidence
N-terminal 1 425 425 0,1049
Central domain 426 690 266 0,8394
C-terminal 691 701 10 0,2392
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-425
Central
426-690
C-terminal
691-701

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Noxifer
[NCBI] 		2006684 Uroviricota > Caudoviricetes > Chimalliviridae > Noxifervirus noxifer >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009608993.1 [NCBI]
Genbank nucleotide accession
NC_041994 [NCBI]
CDS location
range 69041 -> 71146
strand +
CDS
ATGCTCGAACTGTTAATTGGCCTAGGCCGTAAGCAAGGAGCTGCCGACGACTCGGATGTACCCTTTCCTGCCGGCACACCGTTCAAAGGTGTGGTGCCTTCCTCTTCCTTTATTTCAGGCCCGTCCTTAGCTTCGGCTATTGGGCTGTCTGCCGGTGGGGCTTTGAACAACACCCCGGGTTGGCTGCATTTCATAGAAGCCAACGGGTTGGAGCTGTACATCGCCAAGAAGCCTTTGCGTTATGCGGCAACGGCTGAGCAGATCAATCAGGCATTGGGTAATGGCAGTAAAGAAGTCACTATCAATGGCGACGTCTATATCTGCCGTAACATGACGGGTGCTATCTCAAGTGGTGCTGCCGCTGTACCATCGAACGCCGGTGGTGAGTGGAACCGCTACATGTACAACGTGTACGATCAAACAGATCGTGCCGGGATTCCTGATGCTCTGCTCTGGGGTAATTACACCAAAGCGATGCTCGGTATTGCACAAGCTCCAGCGGGTACGAATGACCTAGGTGATGGCGTGTTCACCATCTGTGCTGAAAGCGTGACCAATGGTTTCTTGCTGCGTGGTAACGACTGGCAATCGGCCAGTGGCGGTGGTCAACACATCAAGGGCATCTGGAACATGCCTGCGAACAACCCTCAGACCTACTACGGTTGGCGACCTATCCTCATCAAGAAGTCTACGTTACCACCTTCTGTGTTTCGTGGCGAGGTTGCACCTGCTGACCTGATCACAGGCCCAGCACTGGTGGCGGCCGTCGGCGTGACTACAGGGGCGGCATTCGAAGACGGTAACCCAACATGGTTGAAGTTCGATGAAAACGGCAAGGTTTTCTATATCGCTAAGAAACCACTGCGCACCGGTGTGACGTGGGAAATCCTTAACGGGTTTGGTGCGGTGTATGGTTCGAAGATCATCACGATTGGAAACAAGCGTTATCGCGTTCGCTTGATGACGGGCGGTACTTCTGATCCGATGACCACGGGCGGTGGCGAGTACGATGCGTACTTCTCACGCTGTACGCAGTTCTACAGCGGTGTTGCCTCAGACCGCTTCGCTAGCTACACGGGCCCTGATGTCGGTTGGGTTTCGGGTACAGGCAATGGCCAGTTGTGCTTGGTGCAGGAATACTACAGCACCAGTGGTCCCGGCACACGTGGTTACCCAGGCTTCTTGGGCGTGTGGTATCAGATCGCTAACACCACTCACGCAGGTTATGCTTGGCGTCCTGTGTTGGAAGAGTTGCCACCTGCCCCAACACTGAGTGACACATGGGCACAGATTGCCACATTGCCAGCCGGCGTCAACGGTGCATCGGCTTGTGTGATCGGCGACAAGATGTACGTGTTCGGTGGCCAAGATGCCGCCTTTGTGGTGAAGGGAACTCTTTATGAGGTCAACCTCACCACGGGCGAAGTCCTGACCAAGGCAAGTGACCTGCCGCGACGCTATCATCAAGCCGTTAACATCGGCGGTAAGATGTACGTCTACGGTGGCTACACTTCGGCCTACACGGGCGACGTGCGTATCTATGATCCAGCAACTAACCTATGGACAGGTGGGTTGAGTGGTGTGAACAGTGACCGACATGCCTCTTTCGCTTACAACAACAAGATGTATATCTTGGGTGGTAACGGCGGATCGCAGCTCACCCAAGCACGGACCTATACACCGGCTGGTAACACCTGGACTAACTACACCGCAACTGGTGTAGCGGCAGCACCTTGTTACTTGGGTTCGGCCGACGTCTCTGACAACACGGCCTACACACTGACGGGTTACAACACCCAGAAGGAGTTCCGCTCCATCAACCTGCTCACTAACGTGGGTAAGACAATGCCAGCCCCACCACACGGTGTGTACGGTCATGCACATGGTTCGATGAAAGGCGGTATCTACGTCTTCGGTGGTACAGTCGACACGGCGAACAAAGACAAAGTCACTCTGCGTTATGACATTGTCACCGGTGTGTGGTCTTACCTCGGTGCGATTCCGTACACGATCGGCGAGCGAGCAGCGTCTGCGCAGGACGGCACTAACATCTACCTGGCAGGTGGTGTAGGTTCACCTACCGCGGTCTGGAGGTATACGCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1e236bf6f06110a539241e08036df26c8598564870f28e8e88ab70e0b685815b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7851
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50