Protein

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Genbank accession
APQ41994.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MPSTGKTPTLGLNKWELTDKPKMNDFNKDNENIENFATEHKQKMTEVEKKSKSNEDRLDALRVGTINRLEWYNSESYTGPGNITSITDAPTKRRGFKWSGMSTGPQILEIKTLPIEPNSDYVLAFLEDIEGSFTSYEIKLAYTSGGQQYKSIVKQGSTSQSNGYKLKTHKFSIPSGATDTKIQFVVQGATSSTSLKVLNLLLARGNVVPDYNLAPEDVLKRLDLFFEKDINLQNQINQKAAKVDVIQRVDVPVDRDCNSFKAGNSFCSFDMGNGDFKNTPEGTLPQGSARVFILRNIGLGDGKNRFQQEFINLYPDSNITRYIRNYIYESNSWGKWYKVYDEANKPTPRELGVAAVNMPMADTDLNNHKEPGFYWGYQNMVNAPVPNGVAIMEVVKYNNDCVLQRFTSVRADSNHTTYIRTCYSNKWSSWKKIYDEGNKPTPMDIGAWDKTAKRLEGVDLNTITEGGIYSTVRNSIEKNAPTLADGRLIVLSWNTGHWASQMFFADGGGVFTRTATNMEGTGWTNWAEIYSKQNKPTPADIGASPSNHNHNKVYYPIPKQAITDFNSGIAITEGQHLVSSSTAIPNSPPLYAQDGSSIYGILHVYVSVGDSYNGVNNWIWQDFHDTRGNHYWRYKINNADWSPWRAVYNSVNKPTPQAIGAVATEGDGVINGKLTVDQIVNVSTVGVLASLRNDNMRALLCGVGGTDVYLQNKKSNKFLQLRDDGVLAYSGSLIYHQNNKPTPSEIGAASSGHNHDSAYLKKEDTAANSNKLKNWDLAEGSNNFVGIPFIPHDGVMEVGRMVDFHESGSDKDFNSRLESINGALKCWQDFSAENLWARKYLRINDWYGGAEDGRLWFKQENKKLYTENITDFVVNGRSIAKGDYWDNDNGNVRVCHLGGGLRLVRQIVKTGYANSGGGVSYTIHFSKAWNWVLPISLVSHNYNDASNNTSGYCTIDYWNNSYLNGGCYQMVAGKPTQIILTYLATG
Physico‐chemical
properties
protein length:986 AA
molecular weight: 110100,54860 Da
isoelectric point:7,27047
aromaticity:0,10751
hydropathy:-0,56968

Domains

Domains [InterPro]
DC_1938
ATT
4–367
DC_1938 DC_1209 DC_1159
Coil
Unmapped
30–50
Coil DC_1209 DC_1209
cd19958
STR
361–434
cd19958 cd19958
APQ41994.1
1 986
Architecture
ATT
STR
ATT 4-367 | STR 368-977 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APQ41994.1
1 986
Domain Start End Length (AA) Confidence
N-terminal 1 72 72 0,9675
Central domain 73 275 204 0,4407
C-terminal 276 986 710 0,4569
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-72
Central
73-275
C-terminal
276-986

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage Clo-PEP-1
[NCBI] 		1927016 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APQ41994.1 [NCBI]
Genbank nucleotide accession
KY206887 [NCBI]
CDS location
range 32720 -> 35680
strand +
CDS
ATGCCAAGTACTGGTAAAACTCCTACTCTAGGTTTAAATAAGTGGGAGTTAACAGATAAGCCAAAAATGAATGACTTTAATAAGGATAATGAAAACATTGAGAACTTTGCTACCGAACATAAACAGAAAATGACTGAGGTAGAAAAGAAGTCTAAGTCTAATGAGGATAGGCTAGATGCTTTGAGGGTTGGTACTATTAATAGACTTGAATGGTATAATTCTGAGTCTTATACGGGTCCTGGTAATATCACATCTATTACAGATGCTCCAACTAAGAGACGAGGTTTTAAATGGTCAGGTATGTCAACAGGTCCACAAATTCTTGAAATTAAAACCCTGCCTATAGAACCGAATAGTGATTATGTACTAGCCTTCCTAGAGGATATTGAAGGTAGTTTTACTAGCTATGAGATTAAACTGGCTTACACTAGTGGAGGCCAACAATATAAGAGCATTGTAAAGCAAGGTAGCACATCACAGAGTAATGGGTATAAATTAAAAACTCATAAATTTAGTATTCCCTCTGGAGCTACTGATACTAAAATACAATTTGTGGTACAGGGTGCAACCTCAAGCACATCATTAAAGGTACTAAACCTATTACTAGCTAGAGGTAATGTAGTACCTGACTATAACCTAGCCCCTGAGGATGTACTGAAAAGACTAGACCTATTCTTTGAGAAAGATATTAATTTACAAAACCAAATAAATCAAAAAGCTGCCAAAGTGGATGTGATCCAAAGGGTCGATGTACCTGTGGATAGGGATTGTAATTCCTTTAAAGCAGGAAACTCCTTCTGCTCCTTTGATATGGGGAATGGTGATTTTAAAAATACCCCTGAGGGAACACTGCCCCAGGGGAGTGCTAGGGTATTTATCTTAAGGAATATAGGTTTAGGTGATGGTAAGAATAGGTTTCAACAGGAGTTTATTAATCTATATCCAGATAGTAACATAACCCGATATATTAGAAATTATATCTATGAGAGTAACTCATGGGGTAAATGGTATAAGGTTTATGATGAAGCTAATAAGCCAACACCACGAGAATTAGGTGTAGCTGCGGTTAATATGCCCATGGCTGATACAGACCTTAATAACCATAAGGAACCTGGATTTTATTGGGGTTATCAAAATATGGTCAATGCCCCTGTACCCAATGGTGTAGCAATTATGGAGGTAGTTAAGTATAATAATGATTGTGTATTACAAAGATTTACCTCAGTTAGAGCAGATAGTAACCATACTACTTATATTAGAACCTGCTATTCAAATAAATGGTCTAGCTGGAAGAAGATTTATGATGAGGGTAATAAGCCTACTCCAATGGACATAGGGGCTTGGGATAAAACAGCCAAAAGACTAGAGGGTGTAGATCTAAACACCATTACAGAGGGGGGTATTTATTCTACAGTTAGAAATTCTATTGAAAAAAATGCCCCAACTCTAGCAGATGGGAGATTGATTGTTTTATCCTGGAATACAGGACACTGGGCTTCTCAAATGTTCTTTGCAGATGGTGGAGGAGTTTTTACTAGAACAGCTACAAACATGGAGGGTACTGGATGGACGAATTGGGCTGAAATATATAGTAAACAAAACAAACCTACCCCAGCTGATATAGGGGCTTCTCCTAGTAACCATAATCATAATAAGGTATATTACCCTATACCTAAACAGGCTATTACTGATTTTAATTCCGGTATAGCTATAACTGAGGGTCAACATCTAGTATCTTCTAGTACAGCTATACCTAATTCACCTCCTTTATATGCTCAAGATGGTAGTAGTATATATGGTATACTTCATGTATACGTTAGTGTTGGTGATTCTTATAATGGTGTGAATAACTGGATATGGCAAGACTTTCATGATACTAGGGGTAATCACTACTGGAGGTATAAAATTAATAATGCTGACTGGAGTCCTTGGAGAGCTGTATATAATTCTGTTAATAAACCAACCCCCCAGGCTATAGGGGCTGTAGCTACTGAAGGTGATGGAGTAATAAATGGGAAATTAACTGTAGACCAAATAGTCAATGTTAGCACTGTGGGAGTACTAGCTAGTCTTAGGAATGATAATATGAGAGCTTTATTATGTGGAGTAGGAGGAACAGATGTATATCTCCAAAATAAAAAGTCTAATAAATTTTTACAGTTAAGAGATGATGGTGTATTAGCTTATAGTGGGAGTTTAATTTATCATCAAAATAATAAACCCACTCCCTCTGAGATAGGAGCAGCCTCTTCAGGCCATAATCATGATAGTGCTTATTTGAAGAAAGAAGATACAGCTGCTAATAGTAATAAACTTAAGAACTGGGACTTAGCTGAAGGGAGTAATAACTTTGTGGGTATACCATTTATACCCCATGATGGAGTCATGGAGGTAGGTAGAATGGTTGACTTTCATGAGTCTGGATCTGATAAGGATTTTAATAGTAGATTAGAGTCTATTAATGGAGCCTTAAAGTGTTGGCAAGACTTCTCTGCTGAAAATCTATGGGCTAGGAAATACCTAAGAATAAATGACTGGTATGGTGGAGCTGAAGATGGAAGATTGTGGTTCAAACAAGAGAACAAAAAGTTATATACTGAGAATATTACTGACTTCGTTGTAAATGGTAGGTCTATTGCTAAAGGAGACTATTGGGATAATGACAATGGTAACGTTAGGGTATGTCATCTTGGGGGAGGACTAAGATTAGTTCGTCAAATAGTTAAGACGGGCTATGCTAACTCAGGTGGAGGTGTAAGTTATACTATACATTTCTCTAAGGCTTGGAATTGGGTATTACCTATATCTCTAGTATCACATAACTATAATGACGCTTCTAATAATACCTCAGGTTATTGTACTATTGATTATTGGAATAACTCATATTTGAATGGTGGATGTTATCAAATGGTAGCTGGTAAGCCAACTCAAATAATACTAACCTATTTAGCTACTGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8410bd1c06dc936356d4714640a0cd9dfd67d7ea762a4cfed1939554e2c5b488
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6731
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Virulent Bacteriophage Infecting Clostridium perfringens Park,S.H., Paik,H.R., Jun,S.Y., Yoon,S.J., Kang,M.S., Kang,S.H. and Son,J.S. 1981-12 — GenBank