Protein

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Genbank accession
YP_007678034.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGAEILLPMVYPLNLEEWGINKEFQEPEETTAAFNKAFEYAKSMGYFKILVPPGNFLIDGVNESNIYATENGGGIHLHSNTHYLLHPESVFKINANDAQGYSVFYIGLAYNVTLEGGQLIGDRHEHDYSTSTQNRNTHEFGFGVNVHGSERVNIINVRSRDMTGDNILITNKGNMNYPGQTYIPSKNVTVENCYLETARRNNLSAVGCDGVLIDNCDFIAAGGDTIGPQLGIDFEGYAENGVKYAHPYNLQVKDSRFKNNGRGCFTAHAVGKAIISKNFFDDRVSYGFGTDISIVDNHIINDGEVRPLAIDSIQPPSYDNANRVKISGNTIKGFKKGMTIRGKEVDVIDNKLNNITDTGIHVYLAEEITVNENRVNSDCVPLNIQISEKVNVSDNTFKGGSEKYGVVISGEVEDISFKDNHIEAGGGIDAGVAKNVRILSKNEIFVKGKLNALRNNAGSTVKVNGLNIYDPAAYPMELDGSAGALDIRNVSIYGCKAFIAINIKNGKSHKIKNNDIIFNRGSNGGYGIHLSGTEKAKLTNNYVSTSDGFAIGSPYHTENSTYSTVMNNYYDSGDIKKNDTDRVEANELL
Physico‐chemical
properties
protein length:589 AA
molecular weight: 64505,08660 Da
isoelectric point:5,50596
aromaticity:0,08829
hydropathy:-0,40357

Domains

Domains [InterPro]
IPR012334
STR
29–379
IPR012334 IPR012334
IPR011050
STR
31–373
IPR011050 DC_0453
IPR006626
Unmapped
109–148
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR011050 IPR006626 IPR006626
IPR006626
Unmapped
321–341
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR011050
STR
463–572
IPR011050
YP_007678034.1
1 589
Architecture
STR
STR 29-587 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007678034.1
1 589
Domain Start End Length (AA) Confidence
N-terminal 1 25 25 0,9381
Central domain 26 578 554 0,9946
C-terminal 579 589 10 0,3317
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-25
Central
26-578
C-terminal
579-589

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage PM1
[NCBI] 		547228 Uroviricota > Caudoviricetes > Pemunavirus >
Host Bacillus subtilis subsp. natto
[NCBI] 		86029 Bacteria > Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007678034.1 [NCBI]
Genbank nucleotide accession
NC_020883 [NCBI]
CDS location
range 2791 -> 4560
strand +
CDS
ATGGGGGCAGAAATATTATTGCCAATGGTTTATCCGCTCAATCTTGAAGAATGGGGGATAAACAAAGAATTTCAGGAGCCTGAAGAAACGACAGCAGCTTTTAACAAGGCTTTCGAATACGCCAAGAGCATGGGGTATTTTAAAATTTTAGTTCCGCCGGGCAATTTCTTGATCGACGGAGTAAATGAGTCGAACATATACGCAACCGAAAACGGCGGCGGCATTCATCTTCATTCGAATACGCATTACCTTTTACACCCGGAATCAGTGTTTAAAATCAATGCGAATGACGCACAAGGCTATTCAGTTTTCTATATTGGTCTTGCTTACAATGTTACGTTAGAGGGCGGACAACTGATCGGAGACAGACACGAACACGATTATTCAACCTCAACGCAGAATAGGAATACACACGAATTTGGATTCGGCGTTAATGTGCATGGCAGCGAACGGGTGAATATTATAAACGTCCGTTCCCGCGACATGACAGGCGACAACATCCTAATCACAAACAAAGGAAACATGAACTATCCGGGGCAGACGTACATCCCTTCTAAAAACGTCACTGTAGAGAATTGTTATTTAGAAACAGCGAGACGCAATAACCTTTCTGCCGTGGGTTGTGACGGTGTTCTCATTGATAACTGTGATTTCATTGCAGCGGGCGGAGACACAATAGGTCCGCAACTTGGAATTGACTTCGAAGGGTATGCGGAGAATGGCGTAAAATACGCACACCCGTACAATCTGCAAGTGAAAGACTCTCGTTTTAAAAATAATGGACGCGGTTGTTTCACGGCTCATGCCGTGGGAAAGGCAATCATAAGCAAAAACTTCTTTGATGACCGTGTGTCATACGGATTCGGAACAGATATTTCGATCGTGGACAATCACATCATAAATGACGGAGAAGTCAGGCCTTTGGCAATTGATTCGATTCAGCCGCCTAGCTATGACAACGCAAATCGGGTTAAGATTTCCGGCAATACAATAAAAGGATTCAAAAAAGGAATGACCATCAGAGGAAAAGAAGTGGACGTGATTGACAACAAACTCAATAACATAACTGATACAGGCATTCATGTATATTTAGCCGAAGAAATAACAGTCAATGAAAATAGAGTGAATTCTGATTGCGTTCCGTTAAACATTCAGATTTCTGAGAAAGTTAATGTGTCAGATAATACATTCAAAGGCGGGTCCGAAAAATACGGAGTCGTCATTTCAGGTGAAGTTGAGGACATTTCTTTCAAAGATAACCACATTGAAGCGGGCGGCGGTATAGATGCCGGAGTTGCTAAGAACGTTAGAATTCTAAGTAAAAACGAAATTTTTGTAAAAGGAAAATTGAACGCCTTGCGGAATAATGCAGGTTCAACCGTTAAAGTGAACGGACTTAATATCTACGACCCCGCGGCTTATCCGATGGAGTTAGATGGATCTGCGGGTGCCTTAGACATCAGAAACGTTTCAATATACGGATGTAAAGCGTTCATTGCGATAAACATTAAAAACGGAAAAAGCCACAAAATCAAGAATAACGATATTATATTTAATCGCGGCTCTAATGGTGGATACGGCATACATCTATCCGGGACTGAAAAAGCGAAACTTACAAACAATTATGTGAGTACATCCGATGGTTTCGCAATCGGTTCACCGTATCATACGGAGAATTCCACCTATAGCACCGTTATGAACAACTATTATGATAGCGGTGATATTAAAAAGAACGATACTGATAGAGTCGAAGCGAATGAATTATTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c393590bed2b94273fc196b5dcdbc2edde89a35859c9ff877c04d3346e58def
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8999
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50