Protein

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Genbank accession
YP_009799019.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAIYDAPESLHVGTGTETVFGFNWPYLLPRDLRVTVNGVEVAAVLASTNQVTIVPAPAALAIVRIFRNTPAQNPTYLFATGIPMLPKYIDGNNKQLLYALQEGLLQFAHTQATAEESLRRTAAAEDAAANAAASAAQQARDMRRTVRVPVSDPEIRALPPATTRANKIMGFDAAGQPIGVLPASGSGTELAIDLANMTDPYKGSSLVGYVSTWPGAEGLPVSQKFLGLCLCPEEFGAKGDGVTDDSAAFYAMSQAKGNIRLRPGSNYLLTQEFAVENRVLDMNGSKITFYLTGATQRAVRLMDGSEIRNGFVELTTTHDVDVFGDALIPIIVGQYYEGVGYQNVGIFNMVVLNNRKGGVGVFITGDTSNVVVDRLFCPETDTGAAGIYAEWGGTVGVNTYHPHNMHWSNIVIGKRSVVIGGPDGLLLGTSGCYNVLIENFVVEAGPGCNLHPIGIKVGGGAGFAFAADPSIRDMVSPNVVLRSGKVINNGTRPNAWLYGRSSVGARSWRSGGVRFENIQMVGNSAVNGTLTEYTAGGKFVDVVLSKNLQGHAFGPGVRDIQYVGGSVFECWQHGFNVGNTASPPRDIKILGVETYRNGQRSLTELDTYWSGIFLNNSEGIVVKDCVGGLVEGVETQYTHINAGGLSAGRVKNAKVYDNNTRALRNLRPEDTPAAYIWGANASDYAPAYPDGRFTNNTCDVAVTAQRYAGMRPCIMYQEEAPISSSTSTKVPRSIGPANPTAGSWARGSTMTYTPGAITVPGGKLGSICTTAGDAGSTAVFKNYGAIDS
Physico‐chemical
properties
protein length:788 AA
molecular weight: 83583,27710 Da
isoelectric point:6,12403
aromaticity:0,08503
hydropathy:-0,07754

Domains

Domains [InterPro]
DC_0148
STR
32–788
DC_0148
IPR012334
STR
188–471
IPR012334 IPR012334
IPR011050
STR
233–445
IPR011050
YP_009799019.1
1 788
Architecture
STR
STR 32-788
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009799019.1
1 788
Domain Start End Length (AA) Confidence
N-terminal 1 245 245 0,9945
Central domain 246 717 473 0,9966
C-terminal 718 788 70 0,9653
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-245
Central
246-717
C-terminal
718-788

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiNV3
[NCBI] 		2079544 Uroviricota > Caudoviricetes > Autographivirales > Krylovirinae > Kirikabuvirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009799019.1 [NCBI]
Genbank nucleotide accession
NC_047933 [NCBI]
CDS location
range 36323 -> 38689
strand +
CDS
ATGGCAATTTATGACGCCCCCGAGTCCCTGCACGTAGGGACCGGGACGGAGACAGTGTTCGGCTTTAACTGGCCGTACCTGCTCCCACGAGACCTGCGGGTCACTGTTAACGGTGTCGAGGTGGCCGCTGTACTGGCTTCGACAAACCAAGTGACTATTGTCCCCGCCCCTGCGGCACTGGCAATTGTGCGTATCTTCCGTAACACCCCAGCACAGAACCCCACGTACCTGTTCGCTACCGGCATTCCGATGCTGCCGAAGTACATCGACGGCAACAACAAGCAGCTGCTGTACGCCTTGCAGGAGGGTCTACTCCAGTTTGCACACACCCAAGCCACCGCCGAGGAGTCGCTCCGACGTACAGCGGCTGCTGAGGATGCAGCAGCTAATGCTGCCGCATCCGCCGCTCAGCAGGCGCGGGATATGCGCCGTACAGTACGGGTACCTGTATCCGACCCAGAGATCCGCGCACTGCCGCCTGCTACTACCCGCGCCAACAAGATTATGGGCTTTGACGCAGCCGGTCAGCCTATAGGGGTGCTGCCAGCCAGTGGGTCGGGTACTGAGCTGGCAATTGACCTAGCCAACATGACAGACCCGTACAAAGGCTCCAGCCTCGTGGGGTACGTCTCTACATGGCCCGGCGCGGAGGGGCTCCCCGTATCCCAGAAGTTTTTAGGTCTATGTCTATGCCCGGAGGAGTTCGGAGCTAAGGGTGATGGAGTCACAGATGACAGCGCGGCCTTCTACGCAATGAGTCAAGCCAAGGGGAATATTAGATTACGCCCCGGTAGTAATTACTTGCTCACTCAGGAATTTGCCGTAGAGAATAGGGTGCTGGATATGAATGGATCGAAGATTACGTTCTATCTAACCGGCGCTACGCAACGGGCTGTACGGCTTATGGATGGCTCAGAGATTCGCAACGGGTTTGTTGAGTTGACTACCACCCATGATGTCGATGTTTTTGGCGACGCCTTGATACCGATAATTGTAGGGCAGTATTATGAGGGAGTCGGGTACCAGAATGTAGGGATTTTTAATATGGTTGTACTCAACAACCGCAAAGGTGGGGTGGGAGTATTCATTACAGGGGATACCTCAAACGTCGTAGTAGACCGACTGTTTTGCCCCGAGACTGATACGGGCGCCGCCGGGATCTACGCCGAGTGGGGGGGTACCGTAGGTGTTAACACCTACCACCCACATAATATGCACTGGTCAAATATCGTTATCGGTAAACGTAGTGTAGTAATTGGGGGGCCTGACGGCCTGCTGCTCGGGACATCTGGTTGCTACAACGTATTGATTGAGAACTTTGTGGTTGAGGCTGGGCCGGGATGCAACCTGCACCCAATCGGCATTAAAGTTGGTGGCGGCGCCGGATTCGCCTTTGCAGCTGATCCCAGCATTCGGGACATGGTTTCCCCTAACGTAGTACTCAGGTCGGGTAAAGTTATAAACAACGGAACACGTCCGAATGCGTGGCTGTACGGCCGCTCGTCCGTTGGTGCTAGGTCGTGGCGGTCCGGCGGGGTGCGGTTTGAGAACATCCAGATGGTAGGTAATAGCGCAGTTAACGGCACGCTCACGGAGTACACAGCGGGTGGCAAGTTTGTAGATGTGGTACTGTCTAAAAACTTGCAGGGGCATGCCTTTGGGCCGGGCGTACGTGATATCCAGTATGTAGGTGGCTCTGTGTTTGAGTGCTGGCAACATGGGTTCAACGTAGGGAACACGGCAAGCCCGCCGAGAGATATTAAGATTCTTGGCGTTGAGACCTACCGAAATGGGCAGCGATCCTTGACTGAGTTGGACACCTACTGGTCCGGAATATTCTTAAACAACAGTGAGGGGATTGTAGTTAAGGACTGTGTTGGTGGGCTGGTAGAGGGGGTTGAAACTCAATACACCCATATTAATGCTGGCGGATTATCCGCTGGGAGAGTTAAAAACGCTAAGGTCTACGATAACAATACAAGAGCACTCAGGAATCTAAGACCTGAGGATACCCCTGCGGCGTATATCTGGGGTGCCAATGCTAGCGACTACGCCCCTGCATACCCCGACGGCAGGTTTACCAACAATACTTGTGACGTTGCTGTCACGGCCCAGAGATACGCTGGGATGCGGCCATGTATAATGTACCAGGAGGAAGCGCCTATTAGTAGCTCAACCTCTACTAAGGTGCCTAGGAGTATCGGCCCCGCAAACCCCACAGCAGGTAGCTGGGCTAGGGGGTCTACTATGACCTACACGCCCGGCGCTATCACCGTACCGGGCGGCAAGTTGGGTTCAATTTGCACCACTGCCGGGGATGCTGGGAGTACGGCGGTCTTTAAAAACTATGGCGCGATTGACAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e23e64b3cd1c2bac3d751e1f4407fc74d80e7262345c0567583b0466372c336
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7319
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of phiNV3, a phiKMVvirus-like phage infecting Pseudomonas agarici Storey,N.H. 1997-10 — GenBank