Protein

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Genbank accession
ATG86319.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSTEDALNYFKIQGDDDNSTAKFYGNPNILGNTDYTSVTLDSLGFTVAAVKNQLTGMEEDLTDPVTNEPYPDSYYQAFMEQAVAMAEKEFDIVIRPRRNTDRLDFYREDFNSFVYVRTYERPILHVNQVKMYLNDQTILNYPDKWLKVTNRLGQIELQPSLLSGGYNASVQVPYLATSGYPFGTPPVPQDQFSPQMLGVDYIAGMIPQPPEEVGINREYYPHPDLIAYCAKYAAIEVLERWGRTVIGAGIAGFDVSIDGVSTQLNSTQSAEYTASTADINLMQADMKHIRETLTSYYGGNNIGFIA
Physico‐chemical
properties
protein length:306 AA
molecular weight: 34347,97380 Da
isoelectric point:4,43966
aromaticity:0,11765
hydropathy:-0,35948

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage LpeD
[NCBI] 		2041210 Uroviricota > Caudoviricetes > Herelleviridae > Elpedvirus LpeD >
Host Lactobacillus
[NCBI] 		1578 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATG86319.1 [NCBI]
Genbank nucleotide accession
MF787246.1 [NCBI]
CDS location
range 10126 -> 11046
strand +
CDS
ATGAGTACAGAAGACGCCTTAAATTACTTTAAAATACAAGGTGATGACGACAATTCAACTGCTAAGTTCTATGGTAATCCTAATATTTTAGGAAACACTGATTATACCTCGGTAACTCTTGATAGTTTAGGATTTACCGTTGCCGCCGTTAAAAATCAGCTAACGGGGATGGAGGAAGATTTAACTGACCCGGTAACTAATGAACCCTACCCAGATTCATATTATCAAGCATTTATGGAACAAGCGGTTGCAATGGCTGAAAAAGAATTTGATATTGTTATTAGACCTCGTAGGAACACAGATAGGCTTGATTTTTATAGAGAAGACTTTAATTCATTTGTTTATGTAAGAACTTATGAGAGGCCCATATTACATGTAAATCAGGTTAAAATGTATTTAAATGACCAAACAATTTTAAACTATCCAGACAAGTGGTTAAAGGTTACCAATCGGCTCGGCCAAATTGAGCTTCAACCAAGTTTACTTTCTGGGGGGTATAATGCAAGCGTTCAGGTTCCTTATTTAGCGACTTCCGGATATCCTTTTGGGACTCCACCCGTTCCTCAGGACCAATTTAGTCCTCAAATGCTGGGTGTTGATTATATTGCTGGAATGATTCCACAACCACCCGAAGAGGTAGGGATTAATCGTGAATATTATCCTCATCCCGATTTAATTGCTTATTGTGCTAAGTATGCCGCAATTGAAGTTCTAGAACGTTGGGGACGTACCGTTATTGGTGCTGGTATTGCTGGGTTCGATGTTAGTATTGACGGTGTTAGTACACAATTAAATAGTACCCAATCAGCGGAATATACAGCCAGTACGGCGGATATTAATTTAATGCAGGCTGATATGAAGCACATAAGGGAAACTCTAACAAGTTATTATGGTGGAAATAATATTGGATTTATCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1224fe0721399c07bc0e5e0fd83c99ec1562cda8f8b5fbedca39446342a5920c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7216
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of phages of Lactobacillus pentosus and plantarum Qi,R., Yu,M., Qiao,X. and Li,Y. 2012-01-19 — GenBank