Protein

View in Explore
Genbank accession
XWX34730.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MSNFDLVLDTFDGKISEVLTDVDFESFKYEYEINSTRTISFIIEKTLRNKDIFDNIQNEGTINYKGQLYVIKSLSLSFDNISIKKEIVAHHIMYEFQNHFIDRDLENEQLNADVSDNAPVPKYTLKQVLEFGFRDNPLGYKYKIVGDFPEALEIPEALGDENGIEYLVKHAETFDYIIFGDNKTIYIYEPDKFYKESGVVIRQTLNSEGVSSTINTSDLRTWVIGYGKKKTKSETKNYNPIKTPSLTLNGKFIKTGTWRTETKGDSYEVNVDCLWGNETLDFNFKRGPKGGMWEFYLDDNKFLTASGWYRTMTTDKITVAKNLSKGRHKFKAVFIGPDPNINYKDHKPTGFIGTEKAVILNLTAVLKGEDLYHYKYEYKSPNFKKFPSKKAKTIYEDNAKDLKDLQEKVIKEVNDEPTVEFSATYNGEDVLNERNTVYLKHEPLGFSTELKIVKLTEYHPILNKHVEVEFSNAKKDIVDIQQAINSNILKSSRTGNAVQSDNRITAVSVGSV
Physico‐chemical
properties
protein length:512 AA
molecular weight: 58761,52020 Da
isoelectric point:5,82801
aromaticity:0,11719
hydropathy:-0,57148

Domains

Domains [InterPro]
G3DSA:6.20.110.10
ATT
2–89
G3DSA:6.20.110.10 G3DSA:3.55.50.40 DC_1309 IPR010572
IPR044051
ENZ
7–91
IPR044051 IPR010572
DC_1852
ATT
7–101
DC_1852
XWX34730.1
1 512
Architecture
ATT
STR
ENZ
ATT 2-101 | STR 102-374 | ENZ 375-484 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX34730.1
1 512
Domain Start End Length (AA) Confidence
N-terminal 1 235 235 0,7921
Central domain 236 434 200 0,5355
C-terminal 435 512 77 0,0087
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-235
Central
236-434
C-terminal
435-512

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_67
[NCBI] 		2815633 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX34730.1 [NCBI]
Genbank nucleotide accession
MZ417341 [NCBI]
CDS location
range 30719 -> 32257
strand +
CDS
ATGAGTAATTTTGATTTAGTGCTAGATACTTTCGATGGTAAGATATCAGAAGTTTTAACAGATGTGGACTTTGAAAGTTTCAAGTATGAATATGAAATAAATAGCACAAGAACAATTTCTTTTATTATTGAAAAAACATTGAGAAATAAAGATATATTTGACAATATTCAGAATGAAGGAACAATCAATTATAAAGGTCAGCTATATGTTATAAAATCTTTATCTTTAAGTTTTGATAATATTAGCATAAAAAAAGAAATAGTAGCCCACCATATTATGTATGAATTTCAGAACCATTTCATAGACAGGGATTTAGAAAATGAACAATTAAATGCAGATGTATCTGATAATGCCCCTGTACCTAAATATACTTTAAAACAAGTGCTAGAATTTGGTTTTAGAGATAATCCTTTAGGATACAAATATAAAATAGTTGGAGATTTTCCAGAAGCTTTAGAAATACCAGAAGCTTTAGGAGATGAAAATGGGATTGAATATTTAGTGAAACATGCAGAAACATTTGATTATATAATATTTGGTGACAACAAGACAATTTATATTTATGAACCAGATAAATTTTACAAAGAGTCTGGTGTTGTTATTAGACAAACATTAAACTCAGAGGGTGTTTCATCTACAATAAATACTTCTGATTTAAGAACATGGGTTATAGGTTATGGTAAGAAGAAAACTAAATCTGAAACTAAAAACTACAATCCAATCAAAACTCCATCTCTTACATTAAATGGTAAGTTCATTAAAACTGGAACATGGAGAACAGAAACAAAAGGAGATTCTTATGAAGTAAATGTTGACTGTTTATGGGGAAACGAAACATTAGATTTCAACTTCAAAAGAGGACCTAAAGGTGGTATGTGGGAATTTTATTTAGATGATAATAAATTCTTAACAGCTAGTGGTTGGTACAGAACTATGACAACAGATAAGATTACTGTAGCTAAAAACTTATCTAAAGGAAGACATAAGTTTAAAGCAGTATTCATAGGACCAGACCCGAATATAAACTACAAAGACCATAAGCCTACTGGGTTTATAGGAACTGAAAAAGCAGTTATTTTAAATCTTACTGCTGTATTAAAAGGTGAAGATTTATATCATTATAAATATGAATATAAGTCCCCTAATTTCAAAAAGTTTCCAAGTAAGAAAGCAAAAACAATTTACGAGGATAATGCAAAAGACTTAAAAGACTTACAAGAAAAAGTGATAAAAGAAGTTAATGATGAACCTACAGTAGAATTTTCTGCAACTTATAATGGAGAAGATGTCTTAAATGAAAGAAACACTGTATACTTGAAACATGAACCGTTAGGATTTAGTACAGAATTAAAAATAGTAAAATTAACAGAATATCATCCTATATTAAACAAGCATGTGGAAGTAGAATTTAGTAATGCCAAAAAAGACATAGTTGATATACAACAAGCAATAAATAGTAATATATTAAAATCAAGTAGAACAGGAAATGCTGTCCAATCAGATAATAGGATTACAGCAGTTTCAGTAGGGAGTGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b1d13b3a266e8239bc981f85850a36c6d79f9a3df10cb236b47988d6795afd22
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8604
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank