Protein

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UniProt accession
A0A8S5NBU7 [UniProt]
Protein name
Carbohydrate-binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTAVTQAQDFKVVFRKNNDGLEDRDTSIIYYAKNAPVGTGTLLNYKGNYYIILNKETAENDVYYKSAIQQTDGILNLNTGTVTGLRVICMKTTSISSASDGTMILLSGDLELILEDNSDSKRLTIGGTFNEYGGTYKIKNIMSKNGICHLYCERTADEQPTVNYRLVLGDYNKAYQIPSSTDSGLVGVTKLETTAYMNDQIVSNPTIEWTSSNNDVATIAQDGTVTFIKAGTVNFTARWAEHDVEVTTDEITVTESEPEVNPWTLSITSRYSKMYVNKDMVFTFVTKNDGVKEHLDGLQYEITSDYSFTFVTEKFDTTANTLTLKTTDNGAIGKKFTLRVYHTAKKLEATKDVTVESLI
Physico‐chemical
properties
protein length:359 AA
molecular weight: 39914,23220 Da
isoelectric point:4,91989
aromaticity:0,09192
hydropathy:-0,34652

Domains

Domains [InterPro]
IPR059589
RBD
88–153
IPR059589 DC_1711
G3DSA:2.60.40.1080
STR
171–257
G3DSA:2.60.40.1080
IPR008964
RBD
193–242
IPR008964
IPR003343
STR
194–237
IPR003343
A0A8S5NBU7
1 359
Architecture
RBD
RBD
STR
RBD
RBD 88-153 | RBD 161-170 | STR 171-257 | RBD 258-274 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5NBU7
1 359
Domain Start End Length (AA) Confidence
N-terminal 1 285 285 0,6723
Central domain 286 348 64 0,5053
C-terminal 349 359 10 0,9762
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-285
Central
286-348
C-terminal
349-359

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage sp. ctv3H3
[NCBI] 		2826753 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD91730.1 [NCBI]
Genbank nucleotide accession
BK015120 [NCBI]
CDS location
range 11472 -> 12551
strand +
CDS
ATGACAGCCGTCACACAGGCGCAGGATTTTAAGGTTGTCTTTCGCAAGAATAACGACGGCTTAGAGGATAGAGATACTTCCATTATTTACTATGCTAAAAACGCTCCTGTGGGCACAGGAACGCTTTTAAACTACAAAGGTAACTACTACATCATCTTGAATAAGGAAACGGCAGAAAACGACGTATACTATAAATCAGCCATACAGCAGACAGACGGTATCTTAAATCTTAACACTGGAACTGTCACAGGACTTAGGGTTATTTGCATGAAAACGACCTCAATTTCGTCTGCGAGTGACGGCACGATGATTTTGTTGTCTGGCGATCTAGAATTGATTTTAGAGGACAATAGTGACTCTAAACGCTTAACAATAGGTGGTACATTCAACGAGTACGGTGGCACATACAAGATTAAGAACATCATGTCTAAGAATGGCATCTGTCACTTGTATTGCGAACGTACAGCAGATGAACAGCCAACGGTCAACTATCGACTTGTGTTAGGTGACTATAATAAGGCATATCAGATTCCTTCCAGTACCGACTCGGGACTAGTAGGTGTTACCAAACTGGAAACAACTGCCTATATGAATGATCAAATAGTGTCTAATCCTACTATCGAGTGGACATCATCTAACAATGATGTAGCGACAATCGCACAGGACGGCACAGTAACCTTTATCAAGGCAGGAACGGTCAATTTTACGGCAAGATGGGCAGAACACGATGTTGAGGTTACAACAGACGAAATTACTGTAACTGAGAGCGAGCCAGAGGTTAATCCATGGACGTTATCTATTACGAGTAGATACAGTAAAATGTATGTCAACAAAGACATGGTATTTACGTTTGTTACTAAGAATGATGGCGTAAAAGAACATCTGGATGGTCTACAGTATGAGATTACTAGCGACTATTCATTCACATTTGTAACAGAGAAATTTGACACAACTGCCAATACTTTAACCCTAAAGACAACAGATAATGGTGCGATTGGAAAGAAATTTACGCTTAGAGTGTATCACACTGCCAAGAAACTAGAAGCAACTAAGGACGTTACTGTGGAGTCCTTGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e02d368da371b89fcd57d8c60492cd9e42b0252e15a55618897e9eba45687871
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8692
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50