Protein

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Genbank accession
ABT18008.1 [GenBank]
Protein name
orf20
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVFQFNGYDLNDYFKLIKVSHEIGNERDITTDSAPKIGVNVQQVSFGAKKIKLTVSLATRDLNDNAFVDPNEPAQIDYNMFHHVREQAARVLHSDKPVELKLPDEPDRYYLAIVTGEASLKGISDWYDQAEIEFLVPDGVAHSTTYRSFENPKSVNEKLVFDLVNDGSVNANPIITVKHNSENGYIGLVNSTGICELGDRLEANTEDYRHSEVLFDYASSNSEHRIPNGLSQGLKNIGISNDVNDTKPNGTLYIDNAWGRPHIALQSGQVASVTFDIPRDSSGEKGALYEYFWWRQIFWLGSANQMGYLKICVTDASGTFLYGVETFKRYNGLGCEYNFLAADGKGGFRIVDKKNFLGTHIEQHNPFNEPRGWSDIMRFDDVVQFYWWGSYPRYSIPEIKGKKSDKIHVIFGKVGNAPLVTHMYLDDFIYRKDYVLGVRDIPNRYRAGGEVVIDSETDTVTVDNIPKIVDVVQGSDFLTIPPGKSQLEVYCSSWVTTKPSVSVKFEERYI
Physico‐chemical
properties
protein length:511 AA
molecular weight: 57693,90160 Da
isoelectric point:5,26780
aromaticity:0,11742
hydropathy:-0,40157

Domains

Domains [InterPro]
DC_0077
STR
1–511
DC_0077
G3DSA:2.40.30.200
ATT
2–143
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
14–137
IPR008841
IPR006520
Unmapped
83–143
IPR006520
ABT18008.1
1 511
Architecture
ATT
STR
ATT 1-143 | STR 144-511
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ABT18008.1
1 511
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,9480
Central domain 205 403 200 0,1705
C-terminal 404 511 107 0,5617
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-403
C-terminal
404-511

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage 858
[NCBI] 		2914004 Uroviricota > Caudoviricetes > Aliceevansviridae > Brussowvirus bv858 >
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABT18008.1 [NCBI]
Genbank nucleotide accession
EF529515 [NCBI]
CDS location
range 15046 -> 16581
strand +
CDS
ATGGCCGTGTTTCAATTTAACGGATATGATTTGAATGATTACTTCAAATTAATCAAAGTGTCGCACGAAATTGGGAATGAACGCGATATCACTACAGACTCAGCCCCTAAAATTGGGGTTAATGTTCAACAAGTTTCGTTTGGTGCTAAAAAAATAAAATTAACTGTCAGCTTAGCAACTAGAGACCTTAACGATAATGCTTTCGTAGACCCAAACGAGCCCGCTCAAATTGATTACAACATGTTTCATCACGTAAGGGAACAAGCGGCTAGAGTGCTACACTCTGATAAACCGGTAGAATTGAAATTACCTGATGAGCCAGATAGGTACTATTTAGCGATAGTGACAGGAGAAGCTAGTTTGAAAGGTATCTCTGACTGGTATGACCAGGCTGAAATTGAATTCTTAGTACCTGACGGTGTTGCACATTCAACCACTTACCGAAGTTTCGAAAACCCCAAATCGGTAAATGAAAAGCTAGTATTTGACCTTGTTAACGATGGATCAGTTAATGCTAACCCAATAATTACAGTGAAGCACAATAGTGAGAATGGCTATATTGGATTAGTTAATAGCACAGGTATCTGCGAGCTTGGGGACAGGTTAGAAGCAAATACAGAAGATTATAGACATTCAGAGGTACTTTTTGATTACGCTTCGTCAAACAGTGAGCACAGAATCCCTAACGGTTTATCTCAAGGATTGAAAAACATTGGCATCTCAAACGATGTCAACGACACCAAGCCAAACGGAACTCTTTACATCGATAACGCTTGGGGTCGTCCTCACATTGCATTACAGAGTGGTCAAGTAGCATCTGTTACTTTTGACATCCCAAGAGATTCAAGCGGTGAAAAAGGTGCGCTATATGAATACTTTTGGTGGAGGCAAATTTTCTGGCTTGGTTCTGCGAATCAGATGGGCTATCTGAAAATTTGCGTCACAGATGCAAGCGGCACTTTCTTGTATGGTGTCGAAACTTTTAAACGTTACAATGGTTTAGGCTGTGAATATAATTTTCTAGCTGCTGACGGCAAGGGAGGTTTCCGTATTGTCGACAAGAAGAATTTTTTAGGCACACACATCGAGCAGCACAACCCATTTAATGAACCAAGGGGTTGGTCAGATATAATGAGGTTTGATGATGTCGTCCAATTTTATTGGTGGGGGTCATACCCAAGATATTCTATCCCCGAAATCAAGGGGAAAAAATCAGATAAAATTCATGTCATTTTTGGTAAGGTCGGCAACGCACCACTTGTTACACACATGTATTTAGATGATTTCATTTACCGAAAAGACTACGTCTTAGGTGTCAGGGATATCCCTAATAGATACCGCGCTGGTGGGGAAGTGGTAATAGATAGTGAAACTGATACCGTCACTGTAGATAATATTCCAAAGATTGTCGATGTTGTGCAAGGCTCTGACTTCCTCACAATCCCACCAGGAAAATCACAGCTAGAAGTCTACTGCTCAAGCTGGGTAACAACTAAACCATCCGTATCTGTTAAATTTGAGGAGAGATATATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1714e3190a4b0885e6b44d71d82c381b00d93d9d7ed987bcbcae6137828ce3bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8651
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage response to CRISPR-encoded resistance in Streptococcus thermophilus Deveau,H., Barrangou,R., Garneau,J.E., Labonte,J., Fremaux,C., Boyaval,P., Romero,D.A., Horvath,P. and Moineau,S. 2008 18065545 GenBank
Phage-host interactions are modulated by CRISPR in Streptococcus thermophilus Sylvain,M. and Deveau,H. 2006-04 — GenBank