Protein

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Genbank accession
AET72642.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAISKISGNQIATSTEAIVTTLSFLNTDSVLRIPAGTQAQRPAGVSVGTIRFNTDSDSAEIYKADDGTGNAGWAAISGGGPSLGTDSIIRTNPTTVSENISVGPTAGSEFSNGMSAGPITIANGFTVTVETNGTWSII
Physico‐chemical
properties
protein length:138 AA
molecular weight: 13925,17280 Da
isoelectric point:4,33780
aromaticity:0,05072
hydropathy:0,02754

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM8
[NCBI] 		754038 Uroviricota > Caudoviricetes > Pantevenvirales > Neritesvirus > Neritesvirus scam8
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AET72642.1 [NCBI]
Genbank nucleotide accession
JF974299.2 [NCBI]
CDS location
range 26893 -> 27309
strand +
CDS
ATGGCAATTTCAAAGATTAGCGGCAATCAGATTGCCACTTCAACAGAAGCAATTGTAACTACATTGAGTTTTCTTAATACTGATTCTGTATTAAGAATTCCCGCTGGAACTCAAGCACAAAGACCCGCAGGTGTTTCTGTGGGTACAATTCGTTTCAATACAGATTCAGATTCTGCAGAAATTTATAAAGCAGATGATGGCACTGGTAATGCTGGTTGGGCTGCTATTTCTGGTGGTGGTCCTTCTCTTGGTACAGATAGTATCATTAGGACTAATCCTACAACTGTTTCTGAAAATATTAGTGTTGGACCTACAGCAGGTAGTGAATTTTCTAATGGTATGAGTGCTGGTCCCATTACAATTGCCAATGGATTTACTGTGACAGTTGAAACAAATGGGACCTGGAGTATTATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4594ef7e100126309fa1ce46ef5dcc6c066a1fdef01c82e9875c635a64e62422
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CAM8 0608SB47 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank