Protein

View in Explore
Genbank accession
WLW36874.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MSELRVDIIRSRQGTSTDPGIAFDANGNFTFDGVATFSNGISTTDLTLTSGALQLPSYTTANLPSSPSNGQLVYNTTDNKVFGYVDGAWGQIAGGGGSAPGTVAYMAMSSAPEGWLKANGASISRTTYADLFAAIGTTWGGSGSNFNVPDLRGHFLRAWDDGRGTDSGRGFASFQDHSYQTHRHWISSMATDDRNITGTNGNGQEYGIVSDASSYSSGDRNKSSGRYTRNENGGADETRPKNYALLACIKY
Physico‐chemical
properties
protein length:251 AA
molecular weight: 26585,46840 Da
isoelectric point:5,50261
aromaticity:0,10359
hydropathy:-0,52988

Domains

Domains [InterPro]
DC_1413
STR
6–251
DC_1413
IPR037053
ATT
95–152
IPR037053
SSF88874
STR
100–251
SSF88874
IPR011083
ATT
101–155
IPR011083
WLW36874.1
1 251
Architecture
STR
ATT
STR
STR 6-94 | ATT 95-155 | STR 156-251
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-8S29
[NCBI] 		3038205 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WLW36874.1 [NCBI]
Genbank nucleotide accession
OQ504979.1 [NCBI]
CDS location
range 68381 -> 69136
strand +
CDS
ATGTCGGAACTCAGAGTTGATATTATTAGAAGTAGACAAGGTACTTCAACTGACCCAGGTATTGCATTTGATGCAAATGGTAACTTCACTTTTGATGGTGTTGCTACATTTTCTAATGGCATCTCTACCACAGATTTGACATTAACTTCTGGTGCTCTTCAACTACCAAGTTATACTACAGCAAACCTCCCTAGTTCACCTTCAAACGGTCAGTTGGTGTATAATACAACCGACAACAAAGTTTTTGGGTATGTTGATGGTGCTTGGGGTCAAATTGCTGGCGGTGGTGGTTCTGCACCAGGAACAGTTGCTTACATGGCAATGAGTTCTGCACCTGAAGGTTGGTTAAAAGCAAATGGTGCTAGTATTAGTCGAACGACTTATGCTGATTTATTTGCTGCTATTGGTACAACTTGGGGTGGTTCTGGTAGTAACTTCAATGTTCCAGATTTGAGAGGTCATTTCCTCCGTGCATGGGATGATGGTCGTGGTACTGATAGTGGTCGTGGTTTTGCATCTTTCCAAGACCATAGCTATCAAACTCACAGACACTGGATTTCGTCTATGGCAACTGACGATAGAAACATTACTGGTACAAACGGTAATGGTCAGGAATATGGTATTGTATCTGACGCGAGTTCGTACTCATCTGGTGACAGAAACAAGAGTAGTGGTAGATACACTCGTAATGAAAATGGTGGTGCTGATGAAACCAGACCCAAAAACTATGCTCTTCTCGCTTGCATTAAATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a13379c4657028bfa5753043d5080354c0d4a0271af247a8792c140737a68e20
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7835
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50