Protein

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UniProt accession
A0A8S5LJ57 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MAAYEKQTWVDGETITKAKLDHIEEGIANIELTPGPIGPKGERGETGPAGAAGQKGEKGDPGPAGPKGADAVINKLNKVDALDGGAEVAVVVTAFNNLIADLKAKGFMNEA
Physico‐chemical
properties
protein length:111 AA
molecular weight: 11294,57610 Da
isoelectric point:4,81804
aromaticity:0,03604
hydropathy:-0,34955

Domains

Domains [InterPro]
DC_1397
STR
3–107
DC_1397
IPR008160
STR
34–69
IPR008160
A0A8S5LJ57
1 111
Architecture
STR
STR 3-107 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ct6F13
[NCBI] 		2827602 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD70054.1 [NCBI]
Genbank nucleotide accession
BK015859 [NCBI]
CDS location
range 23227 -> 23562
strand +
CDS
ATGGCAGCATATGAAAAGCAAACATGGGTTGATGGTGAAACAATAACAAAAGCAAAATTAGATCATATAGAAGAAGGGATTGCAAACATAGAACTTACTCCTGGACCTATTGGACCAAAAGGAGAAAGAGGAGAAACCGGACCTGCAGGAGCAGCTGGACAAAAAGGCGAAAAAGGGGATCCGGGACCAGCTGGTCCCAAAGGAGCAGATGCAGTAATTAATAAATTAAATAAAGTAGATGCGTTAGATGGTGGGGCAGAAGTTGCAGTAGTAGTAACAGCATTTAATAATTTAATTGCAGATCTAAAAGCAAAAGGATTTATGAATGAAGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a2af64b0bc3ad3ef857d898f91a98233a2fefb9ac1ee1348c5b407de55ce4006
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7568
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50