Protein

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Genbank accession
YP_009816213.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MYSVQIAVSDGSLSRIALSIEYFEKDDISLYRNLSTVPMVLGDDWQWDGDTHINLLTNVPIPNGEYITVRRNTNIDRAFNIYDGGAAFTRDTLDENFKQMIYLAQEFTEGNGLTGLFFPLNMNGFKITNLGDGTDDKDAINKGQLDGVSDRVSSLEETFVTGGTTSYPWYTITTEPTLVFSPPFLFTKAALYLNGVCQVPGFSYSVSNNQIRLATNVAPGTVVFARLGEDTDAAPEGVTQAQFLALMARVEALENP
Physico‐chemical
properties
protein length:256 AA
molecular weight: 28175,15100 Da
isoelectric point:4,27625
aromaticity:0,10938
hydropathy:-0,13281

Domains

Domains [InterPro]
DC_1609
STR
1–251
DC_1609
IPR011049
STR
114–149
IPR011049 IPR008635
IPR008635
RBD
126–155
IPR008635
G3DSA:6.10.250.2040
STR
127–179
G3DSA:6.10.250.2040
YP_009816213.1
1 256
Architecture
STR
STR 1-251 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PPWS2
[NCBI] 		2153295 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Kotilavirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009816213.1 [NCBI]
Genbank nucleotide accession
NC_048103.1 [NCBI]
CDS location
range 37971 -> 38741
strand +
CDS
ATGTATTCAGTTCAGATTGCTGTATCTGATGGTTCGCTATCCCGAATTGCTCTGAGTATTGAGTACTTCGAGAAGGACGACATTTCACTGTACCGCAATCTGTCCACTGTACCTATGGTACTGGGCGATGATTGGCAGTGGGACGGTGATACACACATCAACCTGCTGACCAACGTACCGATACCTAATGGCGAGTACATCACAGTACGTCGTAACACTAATATCGACCGGGCGTTCAATATCTATGATGGTGGTGCCGCGTTTACGCGGGACACGCTGGATGAGAACTTTAAGCAGATGATTTACCTAGCACAAGAGTTTACTGAGGGGAACGGCCTTACGGGGCTGTTCTTCCCACTGAACATGAATGGGTTCAAAATCACAAACTTAGGCGACGGTACTGATGATAAGGATGCCATTAATAAGGGTCAGTTGGATGGGGTAAGCGACAGGGTATCCAGTCTGGAAGAAACCTTCGTAACAGGTGGTACCACCAGTTATCCGTGGTACACTATCACAACGGAACCTACCTTAGTGTTTTCGCCGCCATTCCTATTTACTAAGGCAGCGTTGTACCTTAATGGTGTGTGCCAAGTACCGGGTTTCAGTTACTCGGTGTCAAACAACCAGATTAGGTTAGCTACTAATGTAGCACCCGGTACTGTTGTATTTGCGCGCTTAGGTGAGGACACAGACGCCGCGCCGGAAGGGGTTACTCAGGCACAGTTCTTAGCACTAATGGCGCGTGTAGAGGCACTGGAGAATCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c25921678c8f5003cdd302bc661a87ecc90276bd9c1af70a4f466a4c1b056b8f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8317
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Podoviridae phage infectious to Pectobacterium Hirata,H. and Kashihara,M. 2009-09 — GenBank