Protein

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Genbank accession
QGZ13160.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MFLADQKSGARVQNCFIGGFNYAINSGLNNTPKVKVIDVGIDCRNGIRINKSFDVSYVTRVHCWPFLSIGFPNRTEEDVQRDGVAFANLGGDATKFTDCFSYGYRVGYQITDTNNAILTNCGADNNPNGTLHASSFGFYLDGETKEPLLTNCQSAGQSAAGIVSILGDVAGYLQLNNCSFWRSAVYQAYIISGEYLISNSSFRGVLGAPETEGLRIESTSKGIVEGNIFSGLFTAVSSTETAVPLIGTNIIKDCANGYNRRDIESVASESTVFLNQERGVFKVTGVSTISNIQNVLAYAGEKITLIFDSTASVNNLGNVKLSSSPFSATSGDTLTLVSDGLSWYEVSRSVNI
Physico‐chemical
properties
protein length:352 AA
molecular weight: 37781,70470 Da
isoelectric point:4,98480
aromaticity:0,09943
hydropathy:-0,03040

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGZ13160.1
1 352
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0055
Central domain 11 261 252 0,9947
C-terminal 262 352 90 0,9815
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-261
C-terminal
262-352

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage XX1924
[NCBI] 		2664192 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alteromonas litorea
[NCBI] 		252597 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ13160.1 [NCBI]
Genbank nucleotide accession
MN592896.1 [NCBI]
CDS location
range 39522 -> 40580
strand -
CDS
ATATTTTTAGCTGACCAGAAATCGGGGGCGAGAGTTCAAAACTGTTTTATTGGTGGGTTTAACTACGCCATAAACTCAGGCTTAAACAATACTCCGAAGGTAAAAGTTATTGATGTTGGGATTGATTGCAGAAACGGAATAAGGATTAATAAGAGTTTTGATGTATCGTACGTAACTAGAGTTCACTGCTGGCCGTTTTTATCCATAGGATTCCCAAACAGAACAGAAGAGGATGTTCAGAGAGACGGGGTAGCCTTTGCCAACTTAGGCGGGGATGCAACAAAATTTACGGATTGCTTTTCATACGGGTATAGAGTTGGATATCAAATAACAGACACAAACAACGCTATACTTACTAATTGCGGGGCGGATAATAATCCAAATGGAACACTGCACGCCAGTAGTTTTGGGTTTTATTTAGACGGTGAAACAAAGGAGCCTTTACTGACTAACTGCCAATCTGCAGGGCAGTCAGCGGCGGGAATAGTGTCAATACTAGGAGATGTTGCTGGCTATCTACAGTTAAATAATTGCAGCTTTTGGAGAAGTGCCGTATACCAAGCATATATTATCTCAGGGGAGTATTTAATATCAAACTCCTCTTTTAGAGGGGTTTTAGGTGCGCCAGAAACGGAAGGTTTGAGGATAGAAAGCACAAGCAAAGGGATTGTAGAAGGTAATATTTTTTCAGGACTCTTCACAGCCGTAAGCTCTACGGAGACAGCCGTGCCTTTAATTGGTACAAATATAATCAAGGATTGTGCTAACGGCTACAACAGACGCGATATAGAAAGTGTGGCTTCTGAATCTACAGTGTTTTTAAATCAAGAGCGAGGTGTATTCAAAGTTACAGGGGTGAGCACAATAAGTAATATACAAAATGTGTTAGCTTATGCAGGTGAAAAGATAACTCTGATATTCGACTCAACTGCTTCTGTTAATAACCTCGGCAATGTTAAGTTAAGCTCTTCCCCTTTTTCAGCTACATCTGGAGATACATTAACACTAGTAAGTGATGGCTTGAGTTGGTATGAGGTGAGCAGAAGTGTTAACATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd13a6f8620ed1669d56cfa3fdfa3c3bd1e625130b1b93d277712bd9e5fd31b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8705
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Alteromonas Phage XX1924 from the Yellow Sea Xue,C. 2017-04-20 — GenBank