Protein

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Genbank accession
YP_009880370.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,69
Protein sequence
MTIKNFTFFSPNSTEFPVGSNNDAKLYMMLTGMDYGTIRRKDWSAPVNTALNVQYTNTSIIAGGRYFELSNETVALKANSVNYIHANIDLTQTTSPVKLSAETLNNSNRTDINNSSGVLKVLIDIRTTNGLGVISSEIPKQITTLDELATKTANIEDLTVKGDIKGWTSVSMQNVASATLQYKKINGAICLRGSGNWGAFKANSTKVVGSLPPEVRPTDNTQFEMTTQRANNNNKPMELQIDTNGTISVWSYSAGSGNYGGVVGTYFQ
Physico‐chemical
properties
protein length:268 AA
molecular weight: 29121,31410 Da
isoelectric point:8,52570
aromaticity:0,07836
hydropathy:-0,33358

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–139
G3DSA:2.60.520.10
G3DSA:2.60.520.10
STR
1–135
G3DSA:2.60.520.10 DC_0707
IPR048780
RBD
2–137
IPR048780
SSF141658
STR
2–139
SSF141658
YP_009880370.1
1 268
Architecture
STR
RBD
STR 1-139 | RBD 140-268
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage MP1
[NCBI] 		2079278 Uroviricota > Caudoviricetes > Skunavirus >
Host Lactococcus lactis subsp. lactis bv. diacetylactis
[NCBI] 		44688 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Lactococcus > Lactococcus lactis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009880370.1 [NCBI]
Genbank nucleotide accession
NC_049434 [NCBI]
CDS location
range 18346 -> 19152
strand +
CDS
ATGACAATTAAAAACTTTACATTCTTTAGTCCAAACAGTACAGAGTTTCCAGTCGGTTCTAATAATGACGCAAAGTTATATATGATGTTGACTGGAATGGACTATGGAACAATCAGGCGCAAAGATTGGTCAGCGCCAGTAAACACAGCCCTAAATGTACAATATACCAATACTTCAATTATTGCTGGAGGTAGATATTTTGAACTATCAAACGAAACGGTAGCTCTAAAGGCTAATTCTGTCAATTATATCCATGCAAATATTGACTTAACTCAAACTACTAGTCCTGTAAAGTTATCAGCTGAAACCTTAAACAATAGCAACAGAACCGATATAAATAATAGTTCAGGTGTCCTAAAGGTTTTGATTGATATCAGAACGACTAATGGTTTAGGGGTAATCAGTTCTGAAATACCAAAACAAATAACTACATTGGACGAATTAGCAACAAAGACAGCTAATATTGAAGACTTGACAGTCAAAGGAGATATCAAGGGCTGGACTAGCGTTTCAATGCAAAACGTAGCTAGTGCAACTCTTCAATATAAAAAAATTAACGGTGCCATTTGTTTACGTGGTTCAGGAAACTGGGGTGCCTTTAAAGCAAATTCTACAAAAGTTGTCGGAAGTTTGCCACCAGAAGTAAGACCAACTGATAACACTCAATTTGAAATGACAACACAACGTGCAAATAACAACAATAAACCAATGGAACTACAAATAGATACTAACGGTACGATAAGCGTATGGAGTTACTCTGCTGGTTCAGGTAACTATGGCGGTGTCGTAGGGACATATTTCCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
18ae597c285e548421e8429a99ccc1444a451671614074a40f1d4168aeb841ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7832
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages play LEGO with their carbohydrate binding domains Mahony,J., Lugli,G., Ventura,M., Vincentelli,R., Nauta,A., van Sinderen,D. and Cambillau,C. 2025 — GenBank