Protein

View in Explore
Genbank accession
YP_009702189.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MMALDRSNRYPGRFENPTTASPQGAFKNRTSPTAQDGSYFEADWTNDWDGFFARILNIAGVTPNGVIDTGSASQLYDALMAATPGRLLNVQRFSSSGSYTPTPGTNFIIVEAVGGGGGGGGSTNIMSAGGGGGAGCYVMASTRSVPSSVTVTIGNGGTGRVNTDGNSGGTTSFGSLISVGGGISGSITLRPSTSDAVVSGTPGPGSKVYTVGASMTLMNVATGGAGSWGFCFNESGDALGGAGGASFFGAGGNPAGISAAQGDPAVSRGAGGSGAAGNAATGTKVGGSGAAGLVIVREYS
Physico‐chemical
properties
protein length:300 AA
molecular weight: 29036,46530 Da
isoelectric point:5,38341
aromaticity:0,07333
hydropathy:-0,03000

Domains

Domains [InterPro]
DC_0934
STR
1–297
DC_0934
IPR049304
STR
97–297
IPR049304
YP_009702189.1
1 300
Architecture
STR
STR 1-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PEAT2
[NCBI] 		2053078 Uroviricota > Caudoviricetes > Jameshumphriesvirinae > Peatvirus peat2 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009702189.1 [NCBI]
Genbank nucleotide accession
NC_044940 [NCBI]
CDS location
range 720 -> 1622
strand +
CDS
ATAATGGCTTTAGACCGCAGCAACCGTTACCCGGGAAGGTTTGAGAATCCCACAACTGCATCACCCCAGGGCGCATTTAAAAACCGCACATCACCAACAGCACAAGATGGTTCTTACTTTGAAGCAGACTGGACTAATGACTGGGATGGTTTTTTTGCACGGATACTCAATATTGCGGGTGTCACACCCAACGGTGTAATTGACACGGGGTCGGCTAGTCAGTTGTATGATGCATTAATGGCGGCAACACCGGGTAGACTACTAAATGTACAGCGATTTTCCTCAAGTGGGTCATATACCCCTACACCGGGGACCAACTTCATCATCGTAGAAGCTGTTGGTGGTGGTGGCGGTGGTGGCGGTAGTACTAATATTATGTCAGCTGGTGGTGGTGGTGGTGCGGGTTGCTACGTGATGGCATCTACCCGGTCTGTACCATCATCCGTAACAGTAACCATCGGTAACGGCGGTACAGGAAGAGTAAATACAGATGGTAATTCCGGCGGTACTACCTCTTTCGGCAGTCTCATTAGTGTCGGCGGTGGTATATCGGGGAGTATTACATTGCGCCCGTCTACGTCCGATGCGGTTGTTAGCGGTACACCCGGCCCTGGCTCCAAAGTATATACTGTTGGTGCCAGCATGACACTGATGAATGTTGCGACGGGTGGTGCCGGTTCATGGGGTTTCTGTTTCAACGAAAGCGGCGATGCACTGGGCGGTGCGGGTGGCGCTTCGTTCTTTGGGGCAGGTGGTAATCCCGCTGGTATATCTGCCGCTCAGGGTGACCCCGCCGTTAGCCGCGGTGCTGGTGGTAGTGGTGCGGCAGGTAATGCCGCGACCGGTACTAAGGTGGGTGGTAGTGGTGCGGCAGGTCTCGTAATCGTGAGGGAGTATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d6e73dc2471b0138160497c329e816de366fcfcce3fd7453fa7e4a9157e5c7f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8621
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of phytopathogenic Pectobacterium atrosepticum bacteriophage Peat2 includes a CRISPR Cas4 nuclease Kalischuk,M., Hachey,J., Thomas,D. and Kawchuk,L. 2019-11-29 — GenBank