Protein

View in Explore
Genbank accession
YP_009809263.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAKRVSITLDVATDVDSRHGLGMTAGLPPEIEGGTMGIMDAVVGAAVDGGGIVVVPGTIEDLTDVEINPSTLAEGDVLVWREARWVNEPQSGGGGGGGNGFQIVLGPVETEGDGSWLPGAVPLADDMAVSEGIDRINEVLGKLVPAQPPEFPNGVLSLSNTGGSSPRLATGVTDNTGDAPYAPGGSVTRVPAAGVSSFAFNDVGPGDSGTVSVWVNDVEVSSRILTGSGDNGIYNGLQIADQKDYPTSQPGFWKSIDVSLNGVPADVGVNKVQVVHSAAGQTAEVYFVRDGMTASPAVSGGSVAEAAQGTLAYSSGVPHYGSGASLTVGGSFTNLSGETYYGGSDIFTASGENGVISGQSYDYSTLGITVPPVRQKTSATAITPVTVSVNGNVHAVGRVQGAARNVNGTGSAVLASTMILVKRGAAPAGKVDEMSVPVTGMGSIPNGDNAVSVTLGDGDTPAGTATVWDPTATLPTYSASVVAGVLKHDQIDYTTGYLPQGPNYSVGRSGPQYRTWSFKRASRSTFRIAVTGSYAGCWIKLPGVSDSQPNAPNGWWNAFAAYDGAGIPGEAGDPAAGCALGSVMNGGSGTFTITFGTQSSTNATGNEVLIRFRLNAGQQITALAYSN
Physico‐chemical
properties
protein length:627 AA
molecular weight: 63378,32460 Da
isoelectric point:4,48303
aromaticity:0,06699
hydropathy:-0,03636

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage CcrPW
[NCBI] 		2283271 Uroviricota > Caudoviricetes > Jeanschmidtviridae > Colossusvirus PW >
Host Caulobacter crescentus CB15
[NCBI] 		190650 Bacteria > Proteobacteria > Alphaproteobacteria > Caulobacterales > Caulobacteraceae > Caulobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009809263.1 [NCBI]
Genbank nucleotide accession
NC_048046.1 [NCBI]
CDS location
range 48980 -> 50863
strand +
CDS
ATGGCGAAGCGAGTCAGCATCACGCTCGACGTGGCGACGGATGTAGATTCGCGTCACGGCCTGGGCATGACCGCAGGTCTTCCGCCGGAGATCGAAGGCGGCACCATGGGTATCATGGATGCTGTCGTCGGCGCGGCTGTCGATGGCGGTGGGATCGTCGTCGTCCCTGGGACGATCGAAGACCTCACGGATGTCGAGATCAATCCGTCCACTCTGGCGGAAGGCGATGTTCTGGTCTGGCGCGAAGCGCGCTGGGTCAACGAGCCTCAGTCGGGCGGCGGTGGTGGAGGCGGTAACGGCTTCCAGATCGTGCTCGGCCCGGTCGAAACGGAAGGCGATGGGTCCTGGCTGCCGGGCGCGGTCCCCCTGGCGGACGACATGGCGGTCAGCGAAGGCATCGACCGCATCAACGAAGTCCTGGGCAAGCTGGTCCCCGCGCAGCCTCCCGAGTTCCCGAACGGCGTCCTGTCGCTGTCGAATACCGGGGGTTCCTCGCCGCGACTGGCGACCGGGGTCACCGATAATACGGGCGACGCACCCTACGCGCCGGGTGGCAGCGTTACGCGTGTCCCGGCGGCAGGTGTCTCTAGTTTCGCCTTCAACGATGTGGGTCCGGGCGACAGCGGTACGGTGTCGGTCTGGGTCAACGATGTCGAAGTCTCCAGCCGCATCCTAACGGGGTCGGGCGACAACGGCATCTACAACGGTCTCCAGATCGCCGACCAGAAGGACTACCCGACTTCGCAGCCGGGCTTCTGGAAGTCGATTGACGTTTCGCTCAACGGCGTCCCGGCGGATGTCGGCGTGAATAAGGTTCAGGTCGTCCATTCGGCCGCAGGCCAGACCGCCGAGGTCTACTTCGTGCGCGACGGCATGACCGCTTCGCCGGCAGTTTCTGGCGGAAGCGTGGCTGAAGCTGCTCAGGGTACGCTCGCCTATTCGTCGGGTGTGCCGCACTACGGTTCGGGCGCGTCGCTCACGGTGGGCGGATCGTTCACGAACCTCTCGGGCGAGACCTACTACGGCGGCTCGGACATCTTCACGGCGTCGGGCGAGAACGGCGTCATCAGCGGCCAGTCGTACGACTATAGCACGCTGGGGATCACGGTCCCGCCCGTGCGTCAGAAGACCAGCGCGACCGCGATCACTCCGGTGACCGTGAGCGTGAACGGAAACGTTCATGCGGTGGGTCGCGTCCAGGGCGCCGCGCGTAACGTGAACGGCACGGGCTCGGCGGTCCTGGCCTCGACGATGATCCTGGTCAAGCGCGGCGCGGCGCCTGCTGGCAAGGTGGACGAGATGTCGGTGCCCGTGACGGGCATGGGCAGCATCCCCAACGGCGACAATGCCGTGTCGGTGACGCTGGGAGATGGCGACACGCCGGCGGGAACTGCTACGGTCTGGGACCCGACGGCGACTCTGCCGACCTATTCTGCCTCTGTCGTGGCGGGCGTGCTCAAGCATGACCAGATCGACTACACCACCGGCTACCTGCCGCAGGGACCCAACTATTCGGTGGGTCGCTCGGGGCCGCAGTACCGCACTTGGTCGTTCAAGCGCGCCTCGCGCTCGACGTTCCGTATCGCGGTCACCGGCTCCTATGCAGGCTGCTGGATCAAGCTGCCGGGCGTCTCGGACTCACAGCCGAACGCCCCGAACGGTTGGTGGAATGCCTTCGCCGCCTATGACGGTGCAGGTATCCCCGGCGAAGCTGGCGACCCCGCCGCCGGCTGCGCGCTCGGCTCCGTGATGAACGGTGGCTCGGGCACGTTCACGATCACCTTCGGCACGCAGTCCTCGACCAACGCGACCGGTAATGAAGTCCTCATTCGCTTCCGGCTGAACGCCGGTCAACAAATCACCGCGCTGGCGTACAGCAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5362c2619c1e6a78fa78d52df6803c3140ef3acbdcbd92751c418f69d1053672
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8599
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Giant CbK-like Caulobacter bacteriophages have genetically divergent genomes Wilson,K. and Ely,B. 2015-10-13 — GenBank