Protein

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Genbank accession
YP_010648616.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MTSPEFWYAKGDKGDPGIQGPPGEQGDEGPSGPPNSLSVGTVTKVPAGGSPSASIGGSAPNQTVNFGLVTGDKGDKGDQGNAGPASALSLGATNTGAPGTNAIVELTGSAPRQVISFTIPRGAKGDKGDQGNVGPEGPRGYGIIANAGTPTVTEPSGPPEEDLIWYLDTITGEFWIWVETSPETFQWVHQPERGSVKGTQGIQGPPGEQGDGGPAGPPNSLDIGTVTPLATGANPTASITGEAPEQTLNLGLPAGPKGDKGDKGDAGEVSTAALNTAVNNAVAALVDGSPGALDTLNELAAALGDDPNFATTMTNALAAKAALTDPRFTDQRVPTDASVTQAKLAPNGGFFNVVNMTDAMDPGYTFGKGNWIIKNNSDPDPANHFLMYIIYGANAGESAGDISARGAMLPLITGLEGGIGLGDKGTISIMDNGVSTTKLANGSVTAAKIAASALPMDMSFIVFGKDTARAAGTGDNPFGHKFQRNVTIQSITFRCLTADASGNLVVEIRKNGSAVSGTSTTIAAANQVGGATTGSLSVNFSAGDIITIYVTGVGTTPGKGLVADIKVVCA
Physico‐chemical
properties
protein length:570 AA
molecular weight: 57132,67820 Da
isoelectric point:4,52174
aromaticity:0,05263
hydropathy:-0,17930

Domains

Domains [InterPro]
IPR050149
Unmapped
10–268
IPR050149 DC_2071
DC_0470
STR
35–430
DC_0470
YP_010648616.1
1 570
Architecture
STR
RBD
STR 35-430 | RBD 453-570
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage GMA2
[NCBI] 		1647283 Uroviricota > Caudoviricetes > Gimaduovirus >
Host Gordonia malaquae
[NCBI] 		410332 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010648616.1 [NCBI]
Genbank nucleotide accession
NC_070761.1 [NCBI]
CDS location
range 36581 -> 38293
strand +
CDS
ATGACTAGCCCCGAATTCTGGTACGCTAAGGGCGATAAGGGTGATCCCGGAATCCAGGGGCCTCCTGGAGAACAGGGGGATGAGGGTCCATCAGGTCCACCAAATAGCCTGTCTGTTGGAACTGTAACCAAGGTCCCCGCTGGCGGAAGTCCGAGCGCCTCAATTGGAGGATCCGCTCCGAATCAGACAGTTAACTTTGGGCTTGTTACCGGCGACAAAGGCGACAAAGGCGACCAGGGAAATGCTGGTCCAGCTAGCGCCCTTTCTCTTGGGGCAACTAACACTGGGGCACCTGGCACGAATGCCATTGTTGAGTTAACTGGTAGCGCTCCAAGGCAGGTAATCTCTTTCACCATCCCTCGCGGAGCGAAAGGCGACAAAGGCGACCAGGGCAATGTCGGACCAGAGGGTCCGCGGGGCTATGGAATTATTGCCAACGCCGGTACCCCGACAGTCACTGAGCCTAGTGGCCCTCCAGAAGAAGATTTGATTTGGTATCTCGACACGATTACCGGTGAATTCTGGATTTGGGTGGAGACTAGCCCAGAAACGTTTCAGTGGGTTCACCAACCAGAGCGAGGCTCTGTCAAGGGCACTCAAGGAATTCAAGGGCCACCCGGTGAGCAGGGTGATGGTGGTCCGGCTGGACCACCCAACTCCCTTGACATCGGAACTGTAACTCCTCTGGCGACTGGGGCCAATCCAACTGCCAGCATCACGGGAGAGGCACCAGAGCAGACCCTTAACCTTGGACTCCCAGCAGGTCCAAAGGGTGATAAGGGCGACAAGGGCGACGCTGGAGAGGTCTCGACTGCCGCCTTGAACACTGCTGTCAATAATGCAGTTGCAGCCCTGGTTGACGGATCACCTGGCGCCCTGGATACGCTGAATGAGTTGGCCGCTGCACTTGGCGACGACCCAAACTTCGCCACTACGATGACGAACGCGCTGGCAGCCAAGGCAGCGCTCACTGATCCCCGGTTCACGGATCAGCGAGTCCCAACGGACGCCTCTGTGACGCAGGCAAAGTTGGCTCCAAATGGCGGATTTTTCAATGTTGTCAATATGACTGATGCCATGGACCCCGGCTACACGTTTGGCAAGGGTAACTGGATCATCAAAAACAATTCTGATCCTGATCCCGCCAATCACTTCTTGATGTACATCATCTATGGCGCCAACGCCGGGGAGTCAGCGGGTGACATTTCTGCCCGTGGAGCTATGCTGCCCCTCATTACCGGCCTAGAAGGTGGCATTGGTCTTGGCGACAAGGGCACAATCTCAATCATGGACAACGGAGTTTCGACAACGAAACTCGCCAACGGTTCAGTGACTGCGGCAAAGATCGCCGCTAGCGCCCTTCCTATGGATATGTCATTCATCGTGTTCGGAAAGGATACGGCCAGAGCTGCTGGCACCGGAGATAATCCATTTGGCCATAAGTTCCAGAGGAACGTGACTATCCAATCTATCACATTCCGGTGCCTGACTGCCGATGCCTCTGGAAATCTTGTAGTCGAAATCCGCAAGAACGGATCAGCAGTAAGCGGCACCAGCACCACCATTGCTGCCGCAAACCAAGTTGGCGGCGCAACTACGGGAAGCCTCTCGGTGAACTTCTCGGCGGGAGACATCATCACGATCTATGTGACCGGAGTTGGCACCACGCCAGGTAAGGGTCTCGTGGCGGACATTAAGGTGGTCTGCGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
22c410749ce1247df770343063e03b624ac5e4dcb8c6a3b60040ab19a94fd463
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6803
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50