Protein

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Genbank accession
QBO61575.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFGRMVKYGNIIIPLDIKKVDLTINGCIILTSDGKLYASGTQSAGQFGLGNRTTLTVRTLIAENVVNFWFSQSGLTILKNDSSYWFSGAAYAYGDSGNVFINIDSLIKDKFDNASEIYVARDHATIIVNSDGSVWVLGSNLYSMIGLASTTTNAPTWTQNTNLTGVSKMQFGHLNACGIRSNGDVVAWGENRFNCFTTVGGTGYLTPRVVKSNVIDFYLTATSCFMWSDATSVYFSGYTGDTGLLNSAAGTTFQSYNIYSVAQPETYVSSEFRFIKHTNYNYGNAVNLPVYVKFRINGEVYSSGYNLSSSLGVNSVSTSVKNTTLVPGASKMTSWVAGDTNVKLATIDGSLYGAGNVQYILDKPSQEIYPTYQNLNII
Physico‐chemical
properties
protein length:380 AA
molecular weight: 41291,88480 Da
isoelectric point:6,81280
aromaticity:0,12368
hydropathy:-0,00342

Domains

Domains [InterPro]
DC_0433
ATT
1–124
DC_0433
IPR009091
STR
11–271
IPR009091
IPR009091
STR
18–358
IPR009091
IPR051553
Unmapped
29–209
IPR051553
DC_0436
RBD
107–205
DC_0436
QBO61575.1
1 380
Architecture
ATT
STR
ATT 1-124 | STR 125-358 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBO61575.1
1 380
Domain Start End Length (AA) Confidence
N-terminal 1 288 288 0,0698
Central domain 289 369 82 0,2732
C-terminal 370 380 10 0,7300
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-288
Central
289-369
C-terminal
370-380

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_G17
[NCBI] 		2502408 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBO61575.1 [NCBI]
Genbank nucleotide accession
MK327931 [NCBI]
CDS location
range 35565 -> 36707
strand +
CDS
ATGTTACCTTTTGGAAGAATGGTTAAGTACGGGAATATTATAATCCCACTTGATATAAAAAAAGTGGATTTAACAATAAATGGTTGTATAATACTTACAAGTGATGGTAAATTATATGCAAGTGGGACTCAATCAGCAGGTCAATTTGGATTAGGAAATAGAACAACACTTACAGTACGTACATTAATAGCCGAAAATGTGGTTAATTTTTGGTTTAGTCAGTCTGGATTAACTATTTTAAAAAATGATAGTTCATATTGGTTTAGTGGAGCAGCATATGCCTATGGAGATAGTGGTAATGTTTTTATTAACATTGATAGTTTAATCAAAGACAAATTTGACAATGCGAGTGAAATATATGTTGCACGTGATCATGCAACTATTATTGTAAACTCAGATGGTTCAGTTTGGGTTTTAGGTTCTAATTTATATAGTATGATTGGGTTAGCAAGTACTACAACAAACGCCCCTACATGGACACAAAATACAAACCTTACTGGTGTTTCTAAAATGCAATTTGGTCATCTGAACGCATGTGGAATAAGATCGAATGGCGACGTTGTTGCGTGGGGTGAGAACAGATTCAACTGCTTCACAACTGTGGGCGGTACTGGTTACCTGACACCAAGAGTAGTTAAGTCAAATGTGATTGATTTTTATTTAACTGCAACATCTTGTTTTATGTGGAGTGATGCTACTTCTGTTTATTTTAGTGGCTATACTGGGGACACTGGATTATTAAATTCTGCGGCTGGTACTACCTTTCAGTCATACAATATATACAGTGTAGCTCAACCGGAAACATATGTAAGTTCAGAGTTTCGTTTTATAAAGCATACAAACTACAACTATGGTAATGCTGTTAACTTACCAGTATACGTTAAATTTAGAATTAATGGTGAAGTTTATAGTAGTGGATATAACTTAAGTAGTAGTTTGGGGGTAAATTCCGTTTCCACCAGCGTAAAAAATACAACTTTAGTTCCAGGTGCATCAAAAATGACATCGTGGGTGGCTGGTGATACTAATGTTAAATTAGCTACTATTGATGGTAGTTTATATGGTGCAGGTAACGTACAATATATTTTAGATAAACCAAGTCAAGAAATTTATCCCACATATCAAAATTTAAATATAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8613bb6033a32e69f8e965954338a1bf49b90dd36af14838041c489526905cc4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7858
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank