Protein

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Genbank accession
AXF39158.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MREHMNNFKNFAPYTPGEDKRELVDAGVLFLLDENGNDWYECQKLFSECTKVIAYDSNNIVVSITDDASTLWPIGLSVAEVDSLPEDVDINGGWVFRDNSVVKRIYSDTELQQQAESKKAALLSHAESVIVTLERAVKLNMATDEERAKLEAWERYSVLVYRVDTAKPEWPEEP
Physico‐chemical
properties
protein length:174 AA
molecular weight: 19832,92420 Da
isoelectric point:4,48030
aromaticity:0,09195
hydropathy:-0,44368

Domains

Domains [InterPro]
DC_1477
STR
1–174
DC_1477
IPR003458
RBD
41–174
IPR003458
IPR051220
Unmapped
107–174
IPR051220
AXF39158.1
1 174
Architecture
STR
STR 1-174
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Punavirus P1
[NCBI] 		10678 Uroviricota > Caudoviricetes > Punavirus >
Host Enterobacteriaceae
[NCBI] 		543 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF39158.1 [NCBI]
Genbank nucleotide accession
MH422554.1 [NCBI]
CDS location
range 27636 -> 28160
strand +
CDS
ATGAGAGAGCATATGAATAACTTTAAAAATTTCGCACCATATACGCCTGGTGAAGATAAAAGAGAGCTTGTTGATGCAGGAGTTTTATTCCTGTTGGATGAAAATGGTAACGACTGGTATGAATGTCAAAAGTTATTTTCGGAATGTACAAAGGTAATTGCGTATGATAGCAACAATATCGTTGTCAGCATTACAGATGACGCCTCAACCCTTTGGCCCATAGGATTATCTGTAGCAGAAGTGGATAGTTTACCTGAAGATGTAGATATCAACGGTGGTTGGGTGTTTAGAGACAACTCTGTTGTTAAACGCATATATTCTGATACGGAGTTACAACAGCAAGCTGAATCAAAAAAGGCTGCCTTACTTTCACATGCCGAATCAGTTATTGTAACTCTTGAGCGGGCGGTTAAATTGAATATGGCAACAGATGAGGAACGAGCTAAACTGGAAGCATGGGAGCGTTATAGCGTGTTGGTTTATCGCGTAGATACAGCTAAACCAGAATGGCCAGAAGAACCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
dadc4a2e2d75f080d4a5139471cc921b8be651a287d5a3ee4b26df12d7dee9f1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8920
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Experimental evidence of massive horizontal gene transfer in the gut microbiota of preterm infants Rudi,K., Ravi,A. and Hagboe,M. 2019-07-01 — GenBank