Protein

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Genbank accession
WOL24896.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSSINIPGFGYSAVPESPNDGQLYGRRNATWELIALSDGVLEAPADGQEYVRKDFQWVLPTYPTYTASNISLTSSLFASTNVHDALEELYYENPLNVVLVRSEDDLPAPQVINGVLTHKLEEKEYVIDGNVTIANSLGFPGAGISATIKAINRSVLTYTGTDAMFYDLGAQGNIEIAGQTEFQAPNADMFNLISGAGGFSFQSRYADRFNNCDRLGEVYCGGLSTIVFNNGTFRNFNQGLVVHDPGFFEVNTFFVFGNNQAGCTYFTVQGTSSTGSINIDTVTCSIGTNETIFNFNPNIQATIDTINVRNCSLRGPLNGKLFAPGSLTPRDFKFESLGNTLIPNTVQGGLLSLSGNATPTVVGAVNTPTLAAGTWVVQETSHFIGSTGGRLTSQVIRDISTSIDASITVEPSSGQGIVIRAYLAKNGVPIAASAKTTTADSGREGFLSLTWQMDISKDDYIELFVENRSGSTSIIVTDAALRIP
Physico‐chemical
properties
protein length:484 AA
molecular weight: 51842,16590 Da
isoelectric point:4,56954
aromaticity:0,09504
hydropathy:-0,04070

Domains

Domains [InterPro]
G3DSA:6.20.230.10
ATT
13–35
G3DSA:6.20.230.10 G3DSA:6.20.230.10
DC_0529
STR
56–484
DC_0529
WOL24896.1
1 484
Architecture
ATT
ATT
STR
ATT 13-35 | ATT 39-61 | STR 62-484
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WOL24896.1
1 484
Domain Start End Length (AA) Confidence
N-terminal 1 116 116 0,8873
Central domain 117 344 229 0,9752
C-terminal 345 484 139 0,9893
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-116
Central
117-344
C-terminal
345-484

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PG216
[NCBI] 		3073608 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WOL24896.1 [NCBI]
Genbank nucleotide accession
OR538032.1 [NCBI]
CDS location
range 135948 -> 137402
strand +
CDS
ATGTCAAGTATTAATATACCTGGATTCGGTTACTCGGCTGTACCTGAATCGCCAAACGATGGGCAGCTATACGGTAGACGAAATGCCACATGGGAGTTAATTGCTCTCTCAGACGGTGTGTTAGAAGCACCCGCAGACGGACAAGAATATGTTCGAAAAGATTTTCAATGGGTTTTGCCAACTTACCCAACTTATACCGCAAGTAATATTAGCCTAACGTCGTCGTTATTCGCGTCAACGAATGTTCACGATGCGCTTGAGGAACTTTACTACGAAAACCCACTCAATGTCGTACTTGTTCGCAGCGAAGATGATCTGCCAGCCCCACAAGTGATCAATGGTGTGTTGACGCACAAACTCGAAGAAAAGGAATATGTCATTGATGGTAATGTTACGATTGCAAATTCACTAGGGTTTCCGGGAGCGGGGATTAGTGCAACGATTAAAGCGATAAACCGTTCGGTGTTGACTTATACTGGAACCGATGCCATGTTCTATGATCTAGGGGCACAAGGAAATATTGAAATCGCTGGTCAGACTGAGTTCCAAGCCCCGAATGCCGACATGTTCAATTTGATTTCTGGTGCGGGTGGTTTCTCATTTCAGTCACGGTATGCTGACCGATTCAATAACTGTGACCGTCTAGGTGAAGTTTACTGCGGCGGATTATCTACGATTGTGTTCAATAACGGTACATTCAGAAACTTCAATCAAGGGCTTGTTGTTCACGACCCGGGCTTTTTTGAAGTAAACACGTTCTTCGTATTCGGTAATAACCAAGCTGGATGCACATATTTCACAGTACAAGGGACATCATCAACTGGCTCGATTAACATCGACACAGTGACATGTTCTATCGGGACAAATGAGACAATTTTCAATTTCAACCCGAATATTCAGGCAACGATTGATACGATCAACGTTCGAAACTGTAGTCTTCGTGGACCACTGAACGGTAAGCTATTTGCACCGGGAAGCTTGACACCGCGTGATTTCAAATTTGAAAGTCTTGGTAACACTCTTATCCCAAATACGGTTCAGGGTGGTTTATTGTCACTATCTGGCAATGCGACCCCAACTGTAGTCGGTGCAGTAAATACTCCAACACTTGCGGCAGGTACATGGGTTGTTCAAGAAACATCACATTTCATAGGTTCAACGGGAGGTCGTTTGACTTCTCAAGTAATCAGAGATATTTCGACTAGTATTGATGCGTCAATTACGGTTGAGCCATCATCGGGTCAGGGTATTGTAATTCGCGCATACTTAGCTAAAAACGGCGTTCCAATTGCCGCTAGTGCGAAAACAACGACGGCTGATAGTGGCAGAGAGGGCTTCTTGTCATTGACATGGCAAATGGACATATCTAAAGACGATTATATCGAGTTATTTGTTGAAAACCGTTCTGGTTCAACGTCGATCATTGTCACAGATGCTGCGTTACGCATCCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3f3c0b0f472a76d932ece4eb050e35c8192a1a403b1dd174f7495c2566531d59
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7928
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50