Protein

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Genbank accession
XRX13881.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPYLGSGYIAGEAPPPLVPDHPDGRTYVDYQIKPLVVKVLHADSFTPISEVKSLPDGTWRIEGLDPAQRYQVIFQNDTYRDSSNTLYNSFIQDWITAVPMPYVAPADELLMAVPLVMERWAMPSTIQAWSVNGGVLTTPTFSGSFTGVTVETNKTSVNVRLVPVQQIGTYTLQVSAIKDTNTITSGLRSFRIRPQQVDTQQFIRFALLGTTPGPASAISTWNRALNNNGTLTNGTFTADADALSPDYPVSLNSNWSADIISGGMFNDGAGNWISLNNGYNNGVTVEGWFNVSTWPTTDSAMLTSIQTSNAASSLIGLTLLPSKRIGTIMKYGSTNSARFENVGEADYTLPTGEWFHVLVHIPPSQADGYLYINGQYVDKWSMIKRNTVPTNTNLTIGYVTFMCNNGQGCTGTAVAKCNRVVWLESRFSNQNFTPSKNKYHEYQATVQCATYGVNGNAVNEMSSCEGTWNTTGNVSSRPVFDPVEGVVFPNTTATDGYAWINISRGYGGVKGSFCLDVWFKPLTAYNGDKNIIQLGNAGSSDGRMHIALNNGKLKSFCAPYTAATGVTMNGTTVLNNNQWYLATLCCDVIQREWRLYLDGTLEASIADPTLAPLALPATSSLIQIILGGRHPLNNSGSGTIPSFHGVIGATRLTVNGPRYYSGFTPTGIGAWDALPARPAA
Physico‐chemical
properties
protein length:680 AA
molecular weight: 73652,92010 Da
isoelectric point:5,94157
aromaticity:0,10147
hydropathy:-0,15456

Domains

Domains [InterPro]
DC_0739
ATT
1–228
DC_0739 IPR013320 G3DSA:2.60.120.200
G3DSA:2.60.120.200
STR
216–414
G3DSA:2.60.120.200 IPR013320
PF13385
LEC
268–398
PF13385 IPR013320
PF13385
LEC
498–614
PF13385
XRX13881.1
1 680
Architecture
ATT
STR
STR
ATT 1-228 | STR 229-414 | STR 447-655 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX13881.1
1 680
Domain Start End Length (AA) Confidence
N-terminal 1 200 200 0,8799
Central domain 201 399 200 0,3989
C-terminal 400 680 280 0,7504
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-200
Central
201-399
C-terminal
400-680

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Yut2
[NCBI] 		3400887 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX13881.1 [NCBI]
Genbank nucleotide accession
PV130723 [NCBI]
CDS location
range 126373 -> 128415
strand +
CDS
ATGCCCTATCTTGGTTCCGGCTATATCGCTGGCGAAGCGCCGCCTCCACTTGTTCCGGATCATCCGGACGGTAGAACCTATGTCGACTACCAGATCAAGCCTCTGGTTGTCAAGGTATTGCATGCAGACTCGTTCACCCCAATCTCTGAGGTGAAGTCTCTGCCGGATGGCACATGGCGCATTGAGGGCTTGGACCCAGCCCAGCGGTATCAGGTGATCTTCCAGAACGATACCTACAGAGATAGCAGCAACACGCTATACAACTCCTTCATCCAGGACTGGATCACGGCTGTCCCTATGCCCTATGTAGCTCCAGCCGATGAGCTGCTGATGGCTGTGCCTCTCGTCATGGAAAGATGGGCTATGCCGTCTACAATTCAGGCTTGGTCTGTCAATGGTGGCGTCTTGACGACTCCCACCTTCTCCGGGTCATTCACTGGAGTTACAGTCGAAACCAACAAGACTAGCGTGAATGTGCGGCTAGTGCCTGTGCAACAGATCGGCACGTACACCTTGCAGGTGTCGGCTATCAAGGACACAAACACTATCACGTCCGGCTTGAGATCCTTCAGAATCCGACCGCAGCAGGTAGACACACAGCAGTTCATCCGCTTCGCTTTGCTTGGCACAACGCCAGGCCCGGCTAGCGCTATTTCCACTTGGAATCGTGCGTTGAACAACAATGGCACCTTGACAAACGGAACGTTCACTGCAGATGCGGACGCGCTATCGCCAGACTATCCTGTGTCTCTGAACAGTAACTGGTCAGCTGATATCATCTCTGGTGGTATGTTCAATGATGGTGCGGGTAACTGGATCTCTCTGAACAACGGCTACAACAATGGAGTCACGGTCGAGGGCTGGTTCAATGTGTCGACTTGGCCCACTACCGATTCAGCTATGCTGACGTCGATCCAGACATCCAATGCTGCATCATCGCTTATCGGCTTGACCCTTTTGCCATCCAAGAGGATTGGCACAATCATGAAGTATGGCTCGACCAACTCGGCTAGGTTCGAGAATGTAGGTGAAGCCGACTACACGTTGCCGACTGGCGAGTGGTTCCATGTGTTGGTCCACATTCCTCCCAGTCAAGCTGACGGCTATCTGTACATCAACGGGCAGTATGTGGATAAGTGGTCGATGATCAAGAGGAACACAGTTCCTACCAACACAAACCTGACCATCGGCTATGTCACCTTCATGTGCAACAATGGTCAGGGCTGCACAGGCACAGCTGTGGCCAAGTGTAACAGGGTTGTGTGGCTTGAGAGTCGCTTCTCTAACCAGAACTTCACTCCATCAAAGAACAAGTATCATGAGTATCAAGCTACCGTCCAGTGTGCCACATATGGGGTCAACGGTAACGCTGTGAATGAGATGAGCTCTTGCGAAGGCACATGGAACACAACAGGCAATGTGTCCTCAAGGCCTGTGTTCGATCCAGTTGAGGGTGTGGTCTTTCCCAACACGACAGCGACAGATGGATATGCTTGGATCAACATCTCGCGTGGGTATGGCGGTGTCAAGGGTTCGTTCTGTCTGGATGTGTGGTTCAAGCCACTGACGGCATACAATGGTGACAAGAACATCATTCAGTTGGGTAATGCTGGTTCATCGGATGGTCGCATGCACATCGCCCTGAACAATGGTAAGCTGAAGTCGTTCTGTGCGCCATACACAGCTGCGACGGGTGTCACCATGAACGGGACGACGGTGCTTAACAACAACCAATGGTATCTGGCCACCTTGTGCTGCGATGTGATCCAGCGCGAGTGGAGACTCTATCTGGATGGTACGCTTGAGGCTAGCATCGCTGACCCCACGCTTGCACCGTTGGCATTGCCGGCTACCTCGTCTCTGATCCAGATCATCTTGGGTGGTCGTCACCCACTGAACAACTCGGGTAGCGGAACGATCCCATCGTTCCATGGCGTCATCGGTGCAACACGATTGACTGTCAATGGACCTCGCTACTACTCCGGCTTTACGCCTACCGGCATCGGCGCATGGGATGCACTGCCAGCTCGCCCAGCGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aba078802abc1878fce8576c0a47e4c978b7a4d2515a28bfd94e4fd4adbc0f05
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6160
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50