Protein

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Genbank accession
YP_010105032.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MATNLSQWERERFNYGEAANDKKGDPIRVHAIKAEHTDNLLFTWLSGGRSEVKLPDALPIERGGTGATSVTSAIRNLGYFEDCNYCLRRGIKVLTTNGTGIVDRFKNLPNASISHVDTGTYDITGITHSTDMWSHVVPLNTSHQPTLNLEFTTIENGVQMKVSTINYANGAPVIGTLIDLPSTVKVDIECK
Physico‐chemical
properties
protein length:191 AA
molecular weight: 20962,36210 Da
isoelectric point:6,05224
aromaticity:0,06806
hydropathy:-0,30838

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage VB_ApiP_XC38
[NCBI] 		2655002 Uroviricota > Caudoviricetes > Schitoviridae > Exceevirus Xc38 >
Host Acinetobacter pittii
[NCBI] 		48296 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010105032.1 [NCBI]
Genbank nucleotide accession
NC_055823.1 [NCBI]
CDS location
range 49220 -> 49795
strand +
CDS
ATGGCAACTAATCTATCTCAGTGGGAGCGTGAACGCTTTAACTACGGTGAAGCAGCCAATGACAAGAAAGGTGATCCTATACGTGTACATGCTATCAAAGCAGAACATACAGATAACCTATTGTTTACTTGGCTTAGTGGTGGCAGGTCTGAAGTGAAGCTACCTGATGCTTTACCTATTGAACGTGGAGGTACAGGTGCTACTTCAGTAACTTCTGCAATTCGTAATTTAGGTTATTTTGAAGATTGTAATTATTGTCTTAGACGAGGTATCAAAGTTCTGACAACCAATGGTACAGGTATTGTTGATCGCTTTAAGAATCTTCCCAATGCATCTATTAGTCATGTAGATACTGGTACTTACGATATTACAGGTATTACACACAGTACTGATATGTGGTCGCATGTGGTTCCTTTAAATACGTCTCACCAGCCTACACTCAATTTGGAATTTACCACTATAGAGAATGGCGTACAGATGAAGGTAAGTACTATCAACTATGCTAATGGTGCTCCTGTAATAGGAACACTAATTGACTTACCTTCCACAGTGAAGGTTGATATTGAATGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
66a78ff5df0954f1b4f338e23b60a17cfd2d1f58cb3014e1f9f8b99916c64cdb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7236
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The characteristics and genome analysis of VB_ApiP_XC38, a novel N4-like phage Infecting Acinetobacter pittii Cheng,M. 2020-05-25 — GenBank