Protein

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Genbank accession
XWX33369.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MKSPGSYKVEGLGLYSDEVQDDNSDRVNITVDSGKAYVLGYRIHKPVSTHIQVDKAMDLSNAENEGTVYNKSQARIRLANTPVNKIGRVSADVLIEKERVGRSQIGDSVDYLANNTAFEVVKVWTETSPGVTTKEYKQGEDYILTDGQTIDWSPGGQEPNGGTSYYVSYKYTKRMVEGTDYVIETGGEGTNKRWFIDFGKGTGAKPIDQSVVRVDYSFYLARQDAIMLDKDGNITAIKGQPNIMRLVEPPIQIDPNTLQLGIITILPNSTQAECLTHAVTRLSMESLQKMKTRIDNLEYNQAINALDDAAMEGQNPMTLRSVFSEGFISLDKADITHPDFGVAFSFEDARATLQYTEAVNEPSIVEGVSTAHIWGRIVSAPFTEERTIYQGQASETMNVNPYNIPNKQGVIKLSPSEDNWIEKENVTITEQKTKTVTMNRWWRHQGTDYGEQQRYLQNNVQLDKGQVWEGKSYAYDKAHGRTGTLLESGGQRTLEEMIEFIRQREVTINVTGLHPNDDNLYLLFDGIRCALTPLTGFSRGSNSGTVRTNAKGQVKAKFMIPAGVRCGNREVTLKNDNSTSATTYSAHGRKKITQDIILRTRLTINLVDPLAQSFIYDENRIISSVGLYFASKGDANSNVTVQIRGIGDQGFPTKTIYAETVMNASDIKVSNNASAETRVYFDDPMMAEAGKEYAVVILTESDAYTMWVGTRTKPLIDKPSQTISGNPYVEGVLYSSSNASAWTIHQNSDLKFGIYTAKFNETATIEFDPIKNVEADRLVLMSTYLTPDNTGCLWEAKIIFENSPIGTTFDTLEWQPIGNYQDVELNGLAKEVKLRATFKSNKYISPLMSVSDLSFTTFLTELSGSYIGRGIDMTEAPYNYIRFSYEGFLPKGCKIVPRYSVDDGITWKTFTTIPKTTTANNEFIKYSYDEKVNSNSTYKKLKVRLDLSTENSFLRPSVRRLMVTTRNE
Physico‐chemical
properties
protein length:968 AA
molecular weight: 108269,28840 Da
isoelectric point:5,53154
aromaticity:0,09194
hydropathy:-0,46952

Domains

Domains [InterPro]
IPR032096
STR
4–427
IPR032096
DC_0082
RBD
402–968
DC_0082
XWX33369.1
1 968
Architecture
STR
RBD
STR 4-427 | RBD 428-968
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX33369.1
1 968
Domain Start End Length (AA) Confidence
N-terminal 1 606 606 0,9222
Central domain 607 826 221 0,1098
C-terminal 827 968 141 0,1321
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-606
Central
607-826
C-terminal
827-968

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_40
[NCBI] 		2815627 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus vitulinus
[NCBI] 		71237 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX33369.1 [NCBI]
Genbank nucleotide accession
MZ417333 [NCBI]
CDS location
range 66446 -> 69352
strand +
CDS
ATGAAGAGTCCTGGCTCTTATAAAGTAGAGGGATTAGGATTATATTCAGATGAGGTACAAGATGATAATAGTGATAGAGTTAATATCACGGTAGATTCAGGTAAAGCATACGTATTAGGTTATAGAATACACAAACCGGTATCTACACATATACAAGTAGATAAAGCTATGGATTTAAGTAATGCAGAGAACGAGGGTACTGTTTACAATAAATCACAAGCAAGAATTAGATTAGCTAACACACCGGTTAATAAGATTGGTAGAGTATCGGCAGACGTTCTTATAGAAAAAGAACGTGTAGGTCGTAGTCAAATTGGAGATAGTGTAGACTATTTAGCTAATAACACGGCTTTTGAAGTTGTTAAGGTGTGGACGGAAACAAGTCCGGGTGTTACGACTAAGGAATATAAACAAGGTGAGGATTATATCCTTACAGATGGTCAAACGATAGATTGGTCACCGGGTGGTCAAGAACCTAATGGTGGAACAAGTTACTATGTATCATATAAATATACTAAACGTATGGTAGAAGGTACGGATTATGTAATTGAGACTGGGGGAGAAGGAACTAACAAACGTTGGTTCATAGACTTTGGTAAAGGTACAGGTGCTAAACCTATTGACCAATCAGTGGTTCGTGTAGATTACTCATTCTATTTAGCTAGACAAGATGCTATCATGTTAGATAAAGATGGTAACATTACAGCTATTAAAGGACAACCTAATATTATGAGATTGGTAGAACCACCTATACAAATTGACCCTAATACCTTACAATTAGGTATTATCACAATATTACCAAATTCAACACAGGCAGAATGTTTAACACATGCAGTTACGAGATTGTCTATGGAGTCATTACAAAAAATGAAAACACGTATTGACAACTTAGAATACAACCAAGCTATTAATGCTTTAGATGATGCTGCAATGGAAGGGCAAAACCCTATGACATTACGTTCGGTATTTAGTGAAGGATTTATTAGCTTAGATAAAGCAGATATTACTCACCCGGATTTTGGTGTAGCATTTAGTTTTGAAGATGCTAGAGCTACTTTACAATATACCGAGGCAGTTAATGAACCTAGTATTGTAGAAGGTGTTTCAACTGCACACATTTGGGGACGTATTGTTAGTGCACCGTTTACAGAAGAGCGTACAATATACCAAGGTCAAGCAAGTGAAACAATGAACGTTAACCCTTATAACATTCCTAATAAGCAAGGTGTAATTAAGTTATCACCTAGTGAAGATAACTGGATTGAAAAAGAAAATGTAACTATTACAGAGCAAAAAACTAAAACGGTAACTATGAACCGTTGGTGGAGACACCAAGGTACCGATTATGGTGAACAACAACGTTACCTACAAAATAATGTACAGTTAGATAAAGGTCAAGTATGGGAAGGTAAATCTTATGCTTACGATAAGGCTCATGGACGTACGGGTACGTTATTAGAGTCGGGTGGTCAACGTACATTAGAGGAAATGATTGAATTTATTAGACAACGTGAAGTTACAATCAATGTTACGGGATTACACCCTAATGATGATAACTTATACTTGTTATTTGACGGAATACGTTGTGCATTAACACCATTAACAGGATTTAGTAGAGGTTCTAATAGTGGAACGGTAAGAACTAATGCTAAAGGACAAGTTAAAGCTAAGTTTATGATACCGGCAGGGGTTCGTTGTGGTAACAGAGAGGTAACACTTAAGAATGATAATTCTACAAGTGCAACAACTTACTCTGCACATGGTCGTAAGAAAATCACTCAAGATATTATCTTACGTACTCGATTAACAATTAACTTAGTTGACCCATTAGCACAATCATTCATTTATGATGAGAACCGTATTATCTCTAGTGTAGGTTTATACTTTGCTAGTAAAGGCGATGCTAACTCAAATGTTACGGTACAAATAAGAGGTATTGGAGACCAAGGTTTCCCAACTAAGACTATTTATGCAGAGACCGTTATGAACGCAAGTGATATTAAGGTATCTAACAATGCTAGTGCAGAAACTAGAGTATACTTTGATGACCCTATGATGGCAGAGGCAGGTAAAGAGTACGCAGTTGTTATTCTTACAGAGTCAGATGCATATACAATGTGGGTAGGTACTAGAACTAAACCACTTATTGATAAACCTAGTCAAACTATTTCAGGTAACCCTTATGTTGAAGGTGTGCTATATAGTTCAAGTAATGCTAGTGCATGGACTATACACCAAAACTCAGACTTGAAATTTGGTATATACACGGCTAAGTTTAATGAGACGGCTACAATTGAATTTGACCCAATTAAAAATGTTGAGGCAGATAGATTGGTTCTTATGTCTACTTACTTAACACCGGATAATACAGGTTGTTTATGGGAGGCAAAAATCATATTTGAAAACTCACCAATAGGTACAACATTCGATACATTAGAATGGCAACCAATTGGTAACTACCAAGATGTAGAGTTGAATGGATTAGCTAAAGAGGTTAAACTTAGAGCTACATTTAAATCTAACAAATATATTTCACCATTAATGAGTGTAAGTGATTTATCATTTACTACTTTCTTAACAGAGTTAAGTGGTTCATATATTGGTAGAGGTATAGATATGACCGAGGCACCATATAACTATATTAGATTTAGTTATGAAGGTTTCTTACCTAAAGGTTGTAAAATTGTTCCTAGATATTCAGTTGATGACGGTATAACATGGAAAACATTTACAACTATACCTAAAACAACAACGGCTAATAATGAGTTTATTAAGTATAGTTATGATGAAAAAGTTAATAGTAATAGTACTTATAAGAAACTTAAAGTACGCTTAGATTTATCTACAGAAAATAGTTTCTTGAGACCAAGTGTTAGACGTTTAATGGTTACAACTAGAAACGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cbfad02e37e1328a03f1e1d7c4c8616cd45d01afb274fcaca11ae75028e4f1c4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8383
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank