Protein

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Genbank accession
QDF14889.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTRIRFRFRRPDASHVSGVPVDGVISCNPTMRVVQEDESLLLPVPFAVRLPSDGGDLTLDLKPTGVDWCWRIEERIKGLTHVRRVIVPDSTQILDYATLSEAAWHGASDNHGGLAHSIRTYPHVIRLGDVVDVDGLRPPDHVSAGDSVVDAEGHLWIVSRFDGGKVTFGIDGGVSLRGPKGERGLSFRSGMGVPDATTQGIVGDTYVDLTTGAVYRCQA
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23706,49360 Da
isoelectric point:5,87104
aromaticity:0,06393
hydropathy:-0,14886

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bifidobacterium phage PMBT6
[NCBI] 		2576879 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bifidobacterium thermophilum
[NCBI] 		33905 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Bifidobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDF14889.1 [NCBI]
Genbank nucleotide accession
MK932884.1 [NCBI]
CDS location
range 32298 -> 32957
strand +
CDS
ATGACGAGGATACGATTCCGGTTCCGCAGGCCGGACGCATCGCACGTGTCCGGCGTGCCGGTGGATGGCGTCATATCCTGCAATCCGACGATGCGGGTCGTGCAGGAGGATGAGAGTCTGCTCCTGCCGGTGCCTTTCGCGGTGCGGTTGCCGTCCGATGGCGGTGATCTGACTCTTGACCTCAAGCCGACCGGCGTGGACTGGTGCTGGCGCATCGAGGAGCGGATCAAGGGGTTGACGCATGTGCGTCGCGTGATCGTCCCGGACAGCACGCAGATTTTGGATTATGCGACTCTTTCCGAGGCTGCATGGCATGGCGCGTCTGACAATCACGGTGGCTTGGCGCATAGCATCCGGACCTATCCGCATGTCATCCGGCTTGGCGATGTGGTGGATGTGGACGGTTTGCGTCCACCTGACCATGTGTCCGCTGGAGATTCGGTCGTGGATGCAGAAGGGCATTTGTGGATCGTCAGCCGTTTCGATGGCGGGAAGGTGACTTTCGGCATTGATGGTGGTGTGAGCCTGCGCGGGCCGAAAGGGGAGCGTGGGCTGAGTTTCCGCAGTGGCATGGGCGTGCCGGATGCGACCACTCAGGGAATTGTGGGTGACACTTACGTTGACTTGACGACTGGTGCCGTGTACCGGTGTCAAGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
302f7ff36830af44ff107de8ca4e3eec343146cfbab5c7626a94726cc55b253a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7646
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of the temperate bacteriophage PMBT6 residing in the genome of Bifidobacterium thermophilum MBT94004 Sprotte,S., Bockelmann,W., Brinks,E., Schleifenbaum,P., Cho,G.S., Fiedler,G., Heller,K.J., Franz,C.M.A.P. and Neve,H. 2020 31676997 GenBank