Protein

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Genbank accession
YP_010101813.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,75
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MRVENLQAETTITENGARVYSPNNKPSASDIGALATNAAAESAKVSETVRNTNLGTTSTSYITIPNVSWYGKAPVGRSQMVKSDSYGLPIAANGYIFKIGARDTSEGSSWIFSTDYSGRGSRVFFGICETSNHDPRWHEVYSPNHKPTAADVGAHPTSWKPAWNDVQGKPQYALRWPNWNEISGKPGSMPPNSHTHPWSQITGQPVYTQRWPNWNEVSGKPGNLLTQTTADTRYMSKTAKPDANTLDGQDSDYYRSGMNYDVRAITVGGDANTYYPVRIEGGAHYAWGRYHISRGYHDTAPPWDNTSTHQGGLTLAIEWSGDGNWGGNDKSIRVVEFNETYSKIVAGLTLATGGLIVWLRGGGARYEIRGPVGVKQSITVYLGNYVDGRKVTYGPRKNTSSVAAEIHNKWFARSNGQLFDSGNRVYSASNKPSAGDVGAYTKGEGDGRYVRFDYSGSSEFARIIPPKSEWVRAPTTGGGFIPYTNGNSYLGTSSWRWKAVYANAIYDNNQRVYSPVNKPSPATIGAEPTLAGDRKRKITYGTGNPSGGASGDIYIQYK
Physico‐chemical
properties
protein length:558 AA
molecular weight: 60957,38680 Da
isoelectric point:9,30661
aromaticity:0,11470
hydropathy:-0,68530

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010101813.1
1 558
Domain Start End Length (AA) Confidence
N-terminal 1 345 345 0,3296
Central domain 346 544 200 0,3312
C-terminal 545 558 13 0,9949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-345
Central
346-544
C-terminal
545-558

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Achelous
[NCBI] 		2576872 Uroviricota > Caudoviricetes > Demerecviridae > Thalassavirus > Thalassavirus achelous
Host Vibrio campbellii
[NCBI] 		680 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010101813.1 [NCBI]
Genbank nucleotide accession
NC_055794.1 [NCBI]
CDS location
range 33246 -> 34922
strand +
CDS
ATGCGCGTAGAGAATTTACAAGCAGAAACAACAATAACTGAAAACGGGGCGAGAGTATACTCGCCTAATAATAAACCAAGCGCCTCTGATATAGGGGCACTAGCTACCAATGCTGCTGCCGAGAGCGCAAAGGTATCTGAGACTGTCAGAAATACCAATCTAGGAACTACATCTACCTCATATATAACTATACCTAATGTCTCGTGGTATGGTAAAGCACCTGTAGGTCGCTCTCAGATGGTTAAGTCAGATAGTTATGGCCTACCTATAGCTGCCAACGGGTATATTTTTAAAATAGGTGCTAGGGATACCAGTGAGGGTAGTAGCTGGATATTCTCCACCGACTACTCAGGGAGAGGAAGTCGCGTATTTTTTGGTATATGCGAGACATCTAATCACGATCCTCGATGGCATGAAGTTTACAGCCCCAACCATAAACCAACAGCAGCAGATGTAGGTGCTCATCCAACTTCATGGAAGCCTGCTTGGAATGATGTACAGGGCAAGCCTCAGTACGCACTACGCTGGCCTAATTGGAATGAGATATCAGGCAAACCTGGTAGTATGCCACCTAACTCACATACGCACCCTTGGTCACAGATTACAGGCCAACCAGTATATACACAGCGTTGGCCAAACTGGAACGAGGTATCAGGCAAGCCTGGGAATCTACTGACACAAACTACTGCCGATACTAGGTATATGAGTAAAACAGCTAAACCTGATGCCAATACTCTGGATGGGCAGGATTCTGATTATTATAGGTCAGGTATGAACTACGATGTAAGAGCAATTACAGTAGGTGGTGATGCTAATACTTACTATCCTGTACGTATTGAAGGTGGAGCTCATTATGCGTGGGGCCGATACCATATCTCTCGTGGATACCATGATACCGCCCCACCTTGGGATAATACATCTACTCACCAAGGTGGGTTGACATTAGCCATTGAGTGGAGTGGTGATGGTAACTGGGGTGGCAATGATAAATCTATACGAGTTGTAGAATTCAACGAAACCTACTCTAAGATCGTAGCAGGGCTAACTCTAGCAACTGGGGGGCTGATTGTATGGTTACGTGGGGGTGGGGCTCGTTATGAAATCAGGGGTCCAGTAGGGGTTAAACAAAGTATTACTGTATATTTGGGCAACTATGTAGATGGCAGAAAAGTAACGTACGGTCCTAGAAAAAATACATCAAGTGTAGCGGCTGAGATACACAATAAGTGGTTTGCACGAAGTAATGGTCAATTATTTGACTCTGGAAACCGAGTATACTCCGCGAGTAATAAACCTAGCGCAGGTGATGTTGGGGCCTACACTAAAGGTGAAGGCGACGGACGCTATGTGAGATTCGACTACTCAGGTAGCTCAGAGTTTGCACGTATAATCCCGCCAAAATCTGAATGGGTACGTGCACCAACCACTGGTGGTGGTTTCATACCATATACTAATGGTAATAGTTATCTAGGTACCAGCTCTTGGAGATGGAAGGCAGTTTATGCTAATGCAATATATGATAATAATCAGAGAGTATATTCTCCAGTAAATAAACCAAGTCCTGCTACTATAGGGGCAGAACCTACACTAGCTGGAGATAGAAAACGCAAGATTACTTATGGTACTGGTAACCCTAGCGGTGGTGCTAGTGGTGATATTTATATTCAATATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d1c63eb9eb6a01076f2604693f4c5dba48e7b1571779c9e080b252d88a85f6c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50