Protein

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Genbank accession
YP_011109315.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGTSISSITASELTAAVEASAASAAAAKDSEIAAKESEINAKDSENLSANYANSSEASATQSATSATEAERQAGLSKDSADASAISVEESKGFRDSAELAAQNAEQSRLLAEQAKKDAEAAKTAAATSEQNAATSATESTNQAIAAAGSATEAGEYATTAKDSEIAAKTSELNAKNSENESAISAEASEASASQSAISASQSAASATKAAESSAAAKISETTAIESSAAAKTSETNAKTSETNAKTSETNAAAYAAAAKTSETNAADSAASASDSKGFRDEAEAFATQASTSALAAKNSETSTKTSESNSKASEAAAKLAQQGASDSANTATQAVTTVQNLKSDVEQLKSDTQTIKDAAVRDVTTLKNTSEGAATTATQKALEAAGSATTASEKATNATSAADRAETAAASAEQVMQASLKKDQNLNDLANKDLAREALKVEAVNSVKDQYAGAYNSFRNPAWTYELRIANNGEWRVARNDNNSTSALSIGAGGTGAENVEGAKINFGIDRLKQTETETMMYAPGSNSPYRITIRPDAAWGVWTDETGRWIPLSIDAGGTGSNTEVGARKNLNTPVGGQAIIIPNNSNILGFMSTYAESGYYSSGELVTYQPPEASGWWMYELHVHGKNANGHVEYGNIVATAMNGNKWGIICSAGSWGGWYRIARSDRQLMLLSPDAQSALGDYSIAIGDHDSGLKWDRDGHISAFADSARIFAWTPSGINTYRVISSYVDDNARGMYVNGVRRGDPNALIAGQVEGGSFADWRSRASGLLVEHTGFDSAVAIFKSVYWGKDWIAGMDVVPWTSGGAETHLYVKGAEFIFDSAGNGSASNWVSRSDIRLKAHLKEIETASDKIDYLTGYTYYKRNNLVEDENSVYSIEAGLIAQDVERVLPEAVHSLNNDGQLDPKGEAIKGINYNGVVALLVNAFKEQKAKIDNQQEEINVLRNELYELKNLVKSMLNGNAPTITELP
Physico‐chemical
properties
protein length:1001 AA
molecular weight: 105128,55410 Da
isoelectric point:4,83128
aromaticity:0,06094
hydropathy:-0,43716

Domains

Domains [InterPro]
DC_0608
ATT
2–192
DC_0608 DC_0415 DC_1205 DC_0971
Coil
Unmapped
132–162
Coil Coil IPR030392
IPR030392
CHP
867–927
IPR030392 Coil
YP_011109315.1
1 1001
Architecture
ATT
STR
STR
RBD
ATT 2-192 | STR 252-516 | STR 543-720 | RBD 721-1001
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011109315.1
1 1001
Domain Start End Length (AA) Confidence
N-terminal 1 531 531 0,7593
Central domain 532 750 220 0,3814
C-terminal 751 1001 250 0,7554
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-531
Central
532-750
C-terminal
751-1001

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage bobsandoy
[NCBI] 		2713284 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus bobsandoy
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011109315.1 [NCBI]
Genbank nucleotide accession
NC_092683.1 [NCBI]
CDS location
range 33330 -> 36335
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAATATCCTAAGTACACAGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGCGAACTAACAGCGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAATAAATGCTAAGGACTCTGAGAACCTATCTGCAAATTATGCTAACTCTTCAGAAGCTTCTGCAACTCAATCTGCTACTTCTGCTACTGAAGCGGAGAGACAAGCTGGTTTATCTAAAGATAGTGCCGATGCCTCTGCTATTTCTGTTGAGGAATCCAAAGGATTCCGTGATTCTGCTGAACTTGCTGCACAAAATGCTGAACAGAGTCGTCTATTAGCTGAACAAGCTAAGAAGGACGCTGAAGCTGCTAAGACTGCTGCTGCTACTTCTGAGCAAAATGCTGCTACATCTGCTACTGAATCTACCAATCAGGCTATTGCTGCTGCTGGTTCTGCTACAGAGGCGGGAGAATACGCTACTACTGCAAAAGACTCCGAGATAGCTGCTAAGACTTCAGAACTTAATGCTAAGAATTCTGAGAATGAATCTGCTATTTCTGCTGAAGCTTCTGAAGCTTCTGCTTCTCAGTCTGCTATTTCTGCTTCTCAATCTGCTGCATCCGCTACTAAGGCTGCAGAATCATCAGCAGCAGCAAAAATTAGTGAAACTACTGCTATAGAATCATCAGCTGCAGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAGACTAATGCGGCAGCATATGCAGCAGCAGCAAAAACTAGCGAGACTAATGCTGCTGATTCCGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTACACAAGCCTCCACCTCAGCATTAGCAGCAAAAAACTCAGAAACTAGTACAAAGACTAGCGAAAGTAACTCAAAAGCTAGTGAAGCCGCCGCTAAGCTAGCTCAGCAGGGTGCATCAGATAGCGCGAACACAGCTACGCAAGCGGTGACCACAGTACAGAATCTTAAGTCCGACGTTGAGCAGTTAAAGAGTGACACGCAGACTATTAAAGACGCCGCTGTGCGCGATGTTACCACGCTTAAAAACACATCTGAGGGTGCTGCAACGACAGCAACTCAAAAGGCCCTAGAGGCTGCTGGTAGCGCTACAACGGCAAGCGAGAAAGCTACTAACGCTACCAGTGCAGCAGATAGAGCGGAGACAGCGGCTGCATCCGCAGAACAGGTTATGCAAGCGTCGTTAAAGAAGGATCAGAACCTTAATGATCTTGCAAACAAAGACCTTGCAAGGGAGGCGCTAAAAGTTGAGGCTGTTAATTCTGTAAAAGATCAATATGCTGGCGCTTATAATTCTTTTCGTAATCCTGCATGGACTTATGAATTACGGATCGCTAACAATGGGGAATGGCGCGTTGCGCGTAATGACAATAACAGCACATCTGCGCTTTCTATTGGTGCTGGCGGTACTGGTGCTGAAAACGTTGAGGGCGCAAAAATAAACTTTGGCATTGATCGTTTAAAGCAAACAGAAACAGAAACTATGATGTATGCACCAGGGAGTAACTCACCTTATCGAATCACAATTAGACCTGATGCGGCGTGGGGTGTTTGGACTGATGAAACTGGAAGATGGATTCCTCTTTCAATTGATGCTGGCGGCACTGGATCTAATACTGAAGTTGGAGCAAGAAAGAACTTAAATACTCCTGTTGGTGGTCAAGCAATTATTATTCCTAATAATTCAAACATTCTTGGGTTTATGTCAACATACGCAGAAAGCGGTTATTACTCAAGCGGAGAACTTGTTACATATCAACCACCTGAAGCCTCTGGTTGGTGGATGTATGAATTGCATGTTCACGGTAAAAATGCAAACGGTCATGTTGAGTATGGAAATATTGTTGCAACCGCAATGAACGGTAATAAATGGGGTATCATTTGCAGTGCTGGCTCTTGGGGTGGATGGTACAGGATAGCAAGATCTGATAGGCAATTGATGTTATTAAGTCCGGATGCTCAATCGGCTCTTGGTGATTACTCTATAGCAATTGGGGATCATGATTCAGGTCTTAAATGGGATCGTGATGGTCACATAAGCGCGTTTGCTGATTCAGCGAGAATATTTGCATGGACTCCATCAGGAATAAACACTTACAGGGTCATATCATCTTATGTTGATGATAACGCAAGGGGTATGTATGTAAATGGAGTTAGGCGCGGTGATCCAAACGCTCTTATTGCTGGTCAAGTTGAGGGTGGTTCATTTGCCGACTGGCGTAGTCGTGCGTCTGGATTGCTTGTTGAGCACACTGGATTTGATTCTGCGGTTGCCATATTTAAATCTGTTTATTGGGGGAAAGATTGGATAGCTGGCATGGATGTTGTTCCGTGGACTTCTGGCGGCGCTGAAACACATCTTTATGTTAAGGGCGCTGAATTTATTTTTGATAGTGCTGGAAATGGTAGCGCATCAAATTGGGTTAGCAGGTCTGACATTAGATTAAAAGCACATCTAAAAGAGATCGAAACGGCATCCGACAAAATTGATTATCTAACTGGTTATACTTACTACAAGCGCAACAATCTAGTTGAAGATGAAAACAGCGTTTATAGTATTGAGGCTGGATTGATCGCACAAGATGTTGAAAGGGTTTTGCCGGAAGCGGTTCATTCTTTGAATAACGATGGTCAGCTAGACCCAAAAGGCGAGGCAATCAAAGGCATTAACTATAATGGTGTTGTCGCACTTCTTGTTAACGCATTCAAAGAGCAAAAAGCAAAGATTGATAATCAACAGGAGGAAATTAACGTATTACGCAATGAGTTATATGAACTGAAAAACCTTGTAAAATCAATGCTTAACGGAAATGCTCCAACAATTACAGAACTACCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f6dfd999762442a0043b81fe312e63e88a37237d198669bf1570dac98307a5db
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5914
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank