Protein

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Genbank accession
XOE93320.1 [GenBank]
Protein name
terminal repeat-encoded protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPHLKAYDKNGEILAIGYNVETEQGSVIIPNLKPHTKYPQGEFFVSWEGYNYESEKVVVPEFTTLESSYKEITFYSKDILVVKTKTAYDIAVDNGFTGTEEEWVKSIKGERGEQGESITIAGISTNNNGAKIITFSDGKELTLPKGEKGESGSDGADANPLTIISSSKKENGDILVSFSDDTSITIPKGDKGEKFTYEDFTQEQLDSLRAKSNYEEIVNNGYSYSEEEYINALNNVTKPYDIKSTHNKNLIDVTELGVIGDGVTDDTAKLQEALDYCSSNNYIATLSKNVLITSTIKTDAYLFMPNGTITANITQGVALQYGKDDSYTQTREVYFPKVLSKINTWDENTTGIRVVNTTESRLYFKNIRNFSKGLNISSTDGKSVVYNDLFLGNLSNNKTNLYIAQEDSTSWINENSFYGGRFSHDNANGVDVSDVYQVVMYTPTDNTHLINNNVFF
Physico‐chemical
properties
protein length:456 AA
molecular weight: 50779,36170 Da
isoelectric point:4,66332
aromaticity:0,10526
hydropathy:-0,53618

Domains

Domains [InterPro]
DC_0876
STR
6–147
DC_0876 DC_1853
IPR012334
STR
243–456
IPR012334
IPR011050
STR
249–451
IPR011050
XOE93320.1
1 456
Architecture
STR
STR
STR 6-147 | STR 200-456
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOE93320.1
1 456
Domain Start End Length (AA) Confidence
N-terminal 1 265 265 0,9762
Central domain 266 445 181 0,9937
C-terminal 446 456 10 0,0505
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-265
Central
266-445
C-terminal
446-456

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_ScoM-YCP
[NCBI] 		3389951 No lineage information
Host Staphylococcus cohnii
[NCBI] 		29382 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOE93320.1 [NCBI]
Genbank nucleotide accession
PQ801475 [NCBI]
CDS location
range 10179 -> 11549
strand -
CDS
ATGCCACATTTAAAAGCATATGATAAAAATGGTGAAATATTAGCTATAGGTTATAATGTAGAAACAGAACAAGGTTCTGTTATTATCCCTAACCTAAAACCTCATACAAAGTACCCACAAGGGGAGTTTTTTGTGTCTTGGGAGGGATATAATTACGAATCAGAAAAAGTAGTTGTTCCTGAATTTACTACACTAGAATCTTCATATAAGGAAATTACTTTCTATTCTAAAGATATACTAGTTGTTAAAACTAAGACCGCATATGACATAGCTGTAGATAACGGTTTTACAGGAACAGAAGAAGAATGGGTTAAATCTATTAAAGGAGAACGAGGAGAACAAGGTGAGTCTATAACAATAGCAGGAATTTCAACTAATAATAATGGAGCTAAAATAATAACTTTTTCTGATGGTAAAGAGTTAACACTACCTAAAGGAGAAAAAGGAGAATCCGGTTCAGATGGTGCTGATGCAAATCCTTTAACTATTATCAGTTCATCAAAGAAAGAGAATGGGGATATTTTAGTTTCTTTTAGTGATGATACTTCTATTACTATTCCGAAAGGAGATAAAGGTGAAAAGTTTACCTATGAAGACTTCACTCAAGAACAGTTAGATAGTCTTAGAGCTAAAAGTAATTATGAAGAAATTGTAAATAACGGGTATTCATATTCTGAAGAAGAATATATAAATGCTTTAAACAATGTTACAAAACCTTATGACATTAAATCAACACATAATAAGAATTTGATTGATGTAACAGAACTTGGTGTTATAGGAGATGGTGTTACTGATGACACAGCTAAACTTCAAGAAGCCTTAGATTATTGTTCTAGTAATAATTACATTGCAACACTATCTAAAAATGTTCTAATAACAAGTACAATTAAAACAGATGCTTATTTGTTTATGCCTAACGGTACGATTACTGCAAATATAACACAAGGTGTAGCATTACAGTACGGTAAAGATGATAGCTACACACAAACAAGAGAAGTTTATTTCCCTAAAGTGTTAAGTAAAATTAATACATGGGACGAAAACACAACAGGAATAAGAGTTGTTAATACAACAGAATCAAGACTATACTTTAAAAATATAAGAAACTTCTCAAAGGGACTTAACATTTCTAGTACAGATGGTAAGAGTGTTGTATATAATGATTTATTCTTAGGTAATTTAAGTAATAATAAAACAAACCTATATATTGCTCAAGAGGATAGTACATCTTGGATAAATGAGAATAGTTTCTACGGAGGTCGGTTCTCTCATGATAATGCAAATGGTGTAGATGTCTCTGATGTATACCAAGTTGTTATGTACACACCAACAGATAATACACACCTAATCAATAATAATGTTTTTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c5f6beff52d7501a3ecd3d6c4a50e397e9cf9b5974382d3da81067fa5d1801e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7427
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50