Protein

View in Explore
Genbank accession
QIN96334.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,77
Protein sequence
MREFTTIVESVAAPSTDKLWINNGVLKYYDGASWKAFTSSGCGCSIEISKQNTWVINGVDTGKPSKGVNGYNGEDGITPKIGPNGNWWICNTDTGVLASGSNGKPGEAGENGITPHIGSNYNWFIASEDTGVLARGTNGKDGDPGPQGPPGEKGDPGEQGTPGVGARTVFAFKVSATIPATPTGGSWNPETDVVTYPVGWSSDDTQEGIVWMSHAVFNTDGNLDNGGWSKPIRMTGEDGINGTDGTSIEFIFKLTQNTYTEPTKPDNDPNTTDYVPDGWTDRPQGISIEMQAEWVCTRTKGETAWSDWDGPSLWSKWGADGRDGDGVEYIFQRKNNAIPPARPTETSQEPEFLPEGWTDNPTGVDSNYQWEWVCLRKYKDGLWGEFSNPALWAKYGEDGTNGENGNSIRVMYAKTDGSDETPPVVEDNINPGSIWGTAMPNYTDNEAIWGIQATVSYDNQLVTNWQGPYLITGVNGKNGTPVNYKTYVFRQSDDKPLGPTSNDPENPGNGWVDYPNTSGNWWQCIGSVNGVTGLVTEWSEVLPLNGRDGTAQDGKFTEFRFAKSSTDDAPIINKTIRTPSGWTLTFPTLGEGDIMWMTKAVINPDDTLYSNWEDPVRISGERGPQGNTGPAGQPGAPGSQGVSGIPGVSYELRYSLGIEDDFDATWNSTVASTRNPSSYGWITELPATTEDKPYIWMTQARIKLADNDDTVGSLQGTWSEPFRLSGVNGLDGAPGPAGKKGQVVYPMGVYSNTTSYTTTDTKAPYVYDPSDGNFYVLNAEMTWLGTEQDNRTPSQDFAANGGEYWLKFDSFEAIYAKIGIIANGLIGSAVFNGDYMFSQQGIDESGTATTAYENFGTENFTPNYQVNFATGEVWFGGGKAKINADGSGYLADGKINFTADGKAIGDLFDKQYALGSINIDLPTVPDGSIKNVILPYYVTRVIPKHNFRVASQSDSLIFKLDGVTRYHVGNLNIESLVGTGHGYLRMTGYYSGTEDATGNSITTWLIEDIHFGEATSYP
Physico‐chemical
properties
protein length:1018 AA
molecular weight: 110289,34600 Da
isoelectric point:4,38282
aromaticity:0,11297
hydropathy:-0,57633

Domains

Domains [InterPro]
DC_1486
ATT
1–76
DC_1486 DC_0947 G3DSA:1.20.5.320
PTHR24637
Unmapped
67–742
PTHR24637
G3DSA:1.20.5.320
STR
136–183
G3DSA:1.20.5.320 DC_0392
QIN96334.1
1 1018
Architecture
ATT
STR
STR
ATT 1-76 | STR 99-603 | STR 620-1009 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage DAC17
[NCBI] 		2710497 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides thetaiotaomicron
[NCBI] 		818 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN96334.1 [NCBI]
Genbank nucleotide accession
MT074138.1 [NCBI]
CDS location
range 16047 -> 19103
strand +
CDS
ATGAGAGAGTTTACAACTATAGTAGAGTCAGTTGCTGCACCAAGTACTGACAAGTTATGGATTAATAATGGTGTATTGAAGTACTATGATGGTGCTTCATGGAAGGCATTTACTTCCTCTGGTTGTGGTTGCTCTATTGAAATCAGCAAACAAAACACATGGGTTATTAATGGTGTTGATACTGGAAAGCCCTCAAAGGGAGTTAATGGTTACAATGGAGAAGATGGTATTACACCTAAGATTGGGCCTAATGGGAACTGGTGGATATGTAATACAGATACTGGTGTATTAGCATCTGGGTCTAATGGTAAGCCAGGTGAAGCAGGTGAGAATGGCATAACTCCTCACATTGGTAGTAACTATAACTGGTTTATAGCAAGTGAAGATACTGGGGTACTTGCCAGAGGCACAAATGGCAAAGATGGAGACCCAGGACCACAAGGCCCTCCAGGAGAGAAAGGTGATCCAGGAGAACAAGGTACACCTGGGGTTGGAGCTAGAACTGTATTTGCTTTCAAAGTAAGTGCAACTATTCCTGCAACACCAACTGGTGGTAGTTGGAACCCTGAGACTGATGTAGTCACTTATCCTGTTGGATGGAGTAGTGATGATACTCAGGAAGGTATTGTCTGGATGTCTCATGCTGTATTCAATACAGATGGTAACTTAGATAATGGAGGTTGGAGTAAGCCTATTAGAATGACAGGTGAAGATGGAATCAATGGTACTGATGGTACTAGCATTGAGTTCATATTTAAGCTAACCCAGAACACCTATACTGAGCCTACTAAACCTGATAATGATCCTAATACTACAGACTATGTTCCTGATGGCTGGACAGACCGTCCTCAAGGTATTTCTATAGAGATGCAAGCTGAATGGGTTTGCACTAGAACTAAAGGTGAAACTGCTTGGAGTGACTGGGATGGACCATCACTTTGGTCTAAGTGGGGAGCTGATGGTAGAGATGGTGATGGTGTTGAATACATCTTTCAGAGAAAGAACAATGCTATACCTCCTGCAAGACCTACTGAAACATCACAAGAACCAGAGTTCCTTCCTGAAGGCTGGACTGATAATCCTACTGGTGTAGATTCAAACTATCAATGGGAATGGGTATGTCTCAGAAAGTACAAAGATGGTCTTTGGGGAGAGTTCAGTAACCCTGCTCTTTGGGCTAAGTATGGTGAAGATGGTACTAATGGAGAGAATGGTAACAGTATTAGAGTAATGTATGCTAAGACTGATGGTTCTGATGAAACTCCTCCTGTTGTTGAAGACAACATAAACCCAGGAAGTATATGGGGAACAGCAATGCCTAACTATACTGACAATGAGGCTATTTGGGGTATTCAGGCTACAGTTAGCTATGATAACCAGTTGGTAACTAACTGGCAAGGTCCATACCTGATTACAGGTGTTAATGGTAAGAATGGGACTCCTGTTAACTATAAGACTTATGTATTCAGACAGAGTGATGACAAGCCTCTTGGACCTACAAGCAATGACCCTGAGAACCCAGGAAATGGTTGGGTAGATTACCCTAATACCTCTGGTAATTGGTGGCAGTGTATTGGTTCAGTAAATGGTGTTACTGGTTTAGTAACTGAATGGAGTGAAGTATTACCTTTGAATGGTAGGGATGGTACTGCACAAGATGGTAAGTTCACTGAGTTTAGATTTGCAAAGAGCTCTACTGATGATGCTCCAATCATTAATAAGACTATAAGAACTCCATCAGGTTGGACACTGACATTCCCTACACTGGGAGAAGGTGACATCATGTGGATGACTAAAGCTGTTATTAACCCTGATGATACTCTCTACTCTAATTGGGAAGACCCTGTTAGAATTAGTGGTGAAAGAGGTCCTCAAGGTAATACTGGTCCTGCTGGACAGCCAGGTGCTCCTGGTAGTCAAGGTGTTAGTGGTATCCCAGGTGTATCATATGAACTAAGATACTCATTAGGAATTGAAGATGACTTTGATGCAACATGGAATAGTACAGTAGCTTCTACTAGAAATCCATCTTCTTATGGTTGGATAACTGAGTTACCTGCTACTACAGAAGATAAGCCTTACATCTGGATGACACAGGCTAGAATCAAACTAGCTGATAATGATGATACAGTTGGCTCACTTCAAGGAACATGGTCAGAACCATTCAGATTGAGTGGTGTTAATGGGCTTGATGGTGCACCTGGACCTGCTGGTAAGAAGGGACAAGTAGTATATCCAATGGGTGTTTATAGTAATACTACATCTTATACTACAACTGATACTAAAGCACCTTATGTATATGACCCAAGTGATGGTAACTTCTATGTACTAAATGCTGAGATGACTTGGTTAGGTACAGAGCAGGATAATAGAACTCCTTCACAAGACTTTGCTGCTAATGGTGGTGAGTATTGGTTGAAGTTTGATTCATTTGAAGCTATCTATGCTAAGATTGGTATCATAGCTAATGGTCTTATTGGTAGTGCTGTATTCAATGGTGACTATATGTTTAGTCAACAAGGAATTGATGAAAGTGGTACAGCTACAACAGCTTATGAGAACTTTGGTACTGAGAATTTTACTCCTAATTATCAAGTTAATTTTGCTACTGGTGAAGTTTGGTTTGGAGGAGGTAAAGCAAAAATAAATGCAGATGGTAGTGGGTATCTAGCTGATGGTAAGATTAACTTCACTGCTGATGGTAAGGCTATAGGAGACCTATTTGATAAACAATATGCTCTTGGGTCTATTAATATAGACCTTCCTACTGTCCCTGATGGGAGTATTAAGAATGTGATACTTCCATATTATGTTACTCGTGTTATACCTAAGCATAATTTCAGAGTTGCAAGTCAGTCAGATAGTCTTATATTCAAGCTAGATGGTGTAACAAGATACCATGTTGGAAATCTCAATATTGAGAGCCTTGTGGGTACAGGGCATGGTTACCTTAGGATGACTGGGTACTATTCTGGAACTGAAGATGCTACTGGAAATAGTATAACCACTTGGTTAATAGAAGACATTCATTTTGGAGAAGCTACAAGTTATCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3de46d58201794500a70e24bbd70f53d5c6aa73196d166787b87bac2d9361e38
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2921
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank