Protein

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Genbank accession
XYO02348.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MANLNKILIEFAQAVSEKVLNALSKIKELEEEIQTISRAKGEQGPPGPSGPPGVQGSPGIQGPPGPSGSDGRNGYTFTPSLSSSGLLSWINDGNLPNPSAINIKGPKGDIGPQGPTGPQGKQGPIGPRGPAGYEGEISNSYNGNRRNVPISEYAVGELYNYVYGSLQAQPERVWAGNVNSGDITLSKNVLGKTVIVLMQHGQSHTLTDNNLVEVVSFNAFNIENKNSGDISFISVIWYHSYADVRQLRFDISVSGTTMRVSSTGGRYLKEVYII
Physico‐chemical
properties
protein length:274 AA
molecular weight: 29186,24790 Da
isoelectric point:6,32319
aromaticity:0,07299
hydropathy:-0,39781

Domains

Domains [InterPro]
Coil
Unmapped
12–39
Coil IPR050149
G3DSA:1.20.5.320
STR
40–88
G3DSA:1.20.5.320 G3DSA:1.20.5.320
DC_2298
STR
80–146
DC_2298
DC_0818
RBD
136–274
DC_0818
XYO02348.1
1 274
Architecture
STR
RBD
STR 40-156 | RBD 157-274
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage Pmp13
[NCBI] 		3127676 Viruses >
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYO02348.1 [NCBI]
Genbank nucleotide accession
OR544130.1 [NCBI]
CDS location
range 37677 -> 38501
strand +
CDS
ATGGCTAACTTAAATAAAATTCTTATTGAGTTCGCTCAAGCAGTCAGTGAAAAAGTTCTTAATGCGTTAAGCAAAATCAAAGAACTTGAAGAAGAAATACAAACGATTAGCAGAGCAAAAGGAGAACAAGGTCCCCCCGGTCCATCTGGTCCACCGGGAGTTCAAGGTTCTCCGGGTATTCAGGGACCACCCGGTCCGTCTGGTTCAGATGGTCGTAATGGATATACATTTACGCCAAGTTTATCTAGTTCGGGATTATTAAGCTGGATTAATGATGGTAATTTACCCAATCCAAGCGCAATAAATATAAAAGGACCTAAAGGTGATATTGGACCTCAAGGGCCCACTGGACCACAAGGGAAGCAAGGACCAATAGGACCTCGTGGTCCCGCAGGTTATGAAGGAGAGATATCTAACTCATACAACGGTAATAGAAGAAATGTTCCAATTAGTGAGTATGCTGTTGGTGAGTTGTACAATTATGTATACGGATCTCTACAAGCACAACCTGAGCGAGTTTGGGCGGGCAACGTGAACTCTGGGGATATTACATTAAGTAAGAATGTATTAGGCAAGACTGTTATCGTTCTCATGCAGCATGGTCAAAGTCACACTCTAACAGATAATAATTTAGTTGAGGTTGTGAGTTTTAATGCGTTTAACATCGAAAATAAAAACAGCGGTGATATATCATTCATTTCTGTTATTTGGTATCACTCATATGCTGACGTTAGACAGCTTAGATTTGATATCAGCGTATCTGGTACAACTATGAGAGTATCTTCAACTGGTGGTAGATATTTAAAAGAGGTATACATTATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e805a742a307fe9c84fe3a77425c7d4810b40156681756925f54057336efc9b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6509
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50