Protein

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Genbank accession
AMR59773.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MATVVKKKRLHELDSYDGDKSSAVALISVDEKEYKLPLSEIGGGADANPIQNLSGADGIVEIDPNIADDFIIRLGDPTTALSITPITDPVPGTRYELLLTLRQGTGANKITWPASVKWPNGAEPPLSYTLDAEDVLSLSSTDGGTTWKGAICGTGY
Physico‐chemical
properties
protein length:156 AA
molecular weight: 16487,30720 Da
isoelectric point:4,45580
aromaticity:0,05769
hydropathy:-0,20128

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage SEGD1
[NCBI] 		1805456 Uroviricota > Caudoviricetes > Chimalliviridae > Seoulvirus SPN3US >
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMR59773.1 [NCBI]
Genbank nucleotide accession
KU726251.1 [NCBI]
CDS location
range 105541 -> 106011
strand +
CDS
ATGGCAACTGTAGTCAAAAAGAAACGTTTGCATGAACTCGATTCTTACGACGGTGATAAGTCGAGCGCAGTAGCGCTTATTAGCGTTGATGAAAAGGAGTACAAACTTCCTCTCAGTGAAATCGGCGGCGGGGCAGATGCAAACCCTATCCAAAACTTATCCGGTGCTGACGGTATCGTTGAAATAGATCCCAATATTGCGGACGACTTCATTATCCGTTTAGGTGACCCCACCACTGCGCTTTCTATCACACCTATTACCGACCCGGTTCCGGGTACGCGATATGAATTATTACTGACGCTACGTCAGGGTACCGGTGCAAACAAAATCACCTGGCCGGCTTCGGTTAAATGGCCTAACGGTGCAGAACCTCCGTTATCGTACACGCTAGACGCCGAGGATGTGTTGTCGTTGTCATCTACGGATGGCGGTACAACCTGGAAAGGGGCCATTTGCGGAACAGGATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
81cd417b5b2e7f953cceb1c277cce69b44c46ea06d3ae9c69cb8dfd17b88c922
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8477
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a polyvalent bacteriophage, SEGD1, simultaneously inhibiting both Salmonella enterica and Escherichia coli O157:H7 Fan,J. and Ma,J. 2018-03-02 — GenBank