Protein

View in Explore
Genbank accession
XNZ85539.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKTVGSLPSLIQGVSEQEPHNRAPGKMWESVNMMDSPTRGKVRRRGTVMSDHKPLASAVAGALAEAGRMQEYTFIIDGREFSLTYRPSASALGKDYFATLLAKDTGDFYDIVYEDSTWVDNLIAGGVSAIACVGRYVYIAGNTTLPRATSTEAWNSPANLQKLSGWIREGAYSRKFTARLTLTDGTTKDYSYTTKPAAYPELLDTSDIPFYKPGNADPKEPDPEYQKKVNDRVNAYEGNKTAWIKEAAEDIVPANIARKIAELIVADGYFASSMESCVVIDDPAFNDIRMLDDGAGTLVSYAGKEVSDPQFVTLYHWSGKVVRVRPSGGGDKESYYLKAVPLDGADGWAKVEWVETAGVVHEIHNVVSQLIVDVPNKKAYVAQDGQGLKSLAPHMGDHPLYKSNAVGDAVTAPLPHYFGRPITCMTVFQDRLMLSADNIVNFSRSSDYLNFFRQTVLNVQENDPIEIFAHGSEGDTIKKAVMFERDLVLFGELRQYAISGREFLSPTNPNINVIGAFEGGATANPIVSGNFLFFGKHANERTGLHQMQPGDTPQTTVVYEVSQELDSWISGEPVQLLGMTQPDMVTYRTDADSSIWYTYKYSDDRSVGRIMSSWGKQQYAPELGSVASITHYRGDQFVVTLRTAGGKDYWFADRLNLNADLSKLPHLDSQVPYGSETEWHKAVQEKLFVAATAESDYYLMGAPRSQAEDFIEQAPGVEPALVVGSVSPAYFQLTNPYMRDSQGQPILNGRLTLTSYGFHLADTGGLSAYVLAPTKDRTLLFEGRVLGHTSNIIGRQPVFSGMRTVSVGKETRACIVELRSEDWQPLRVTGAEWSGQVFMPRARGLY
Physico‐chemical
properties
protein length:847 AA
molecular weight: 93387,87100 Da
isoelectric point:5,38330
aromaticity:0,10153
hydropathy:-0,32137

Domains

Domains [InterPro]
DC_0058
STR
1–847
DC_0058
IPR058003
TTP
235–842
IPR058003
XNZ85539.1
1 847
Architecture
STR
STR 1-847
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNZ85539.1
1 847
Domain Start End Length (AA) Confidence
N-terminal 1 190 190 0,8818
Central domain 191 401 212 0,3031
C-terminal 402 847 445 0,3645
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-190
Central
191-401
C-terminal
402-847

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SBP1
[NCBI] 		3162005 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNZ85539.1 [NCBI]
Genbank nucleotide accession
PQ498454 [NCBI]
CDS location
range 19433 -> 21976
strand +
CDS
ATGGCTAAGACCGTTGGCAGCTTGCCATCACTGATTCAGGGTGTCTCCGAACAGGAGCCGCACAACCGGGCACCCGGTAAAATGTGGGAGAGCGTCAACATGATGGACTCCCCGACCCGTGGTAAGGTGCGCCGTCGCGGTACTGTCATGTCCGACCACAAGCCTCTGGCGTCCGCAGTAGCAGGCGCGCTCGCCGAGGCAGGGCGTATGCAGGAGTACACCTTCATCATCGACGGACGGGAGTTCAGCCTCACGTACCGACCGAGTGCCAGTGCGCTGGGCAAGGATTACTTTGCCACGCTTCTGGCGAAGGATACCGGGGACTTCTACGACATCGTTTACGAGGACAGCACATGGGTAGACAACCTGATCGCGGGCGGAGTCTCGGCAATCGCCTGTGTAGGCCGCTACGTGTACATCGCGGGGAACACCACCCTGCCGCGCGCGACTTCTACCGAAGCGTGGAACTCACCCGCCAACTTGCAGAAGCTGTCGGGTTGGATTCGAGAAGGCGCGTACAGCCGGAAGTTCACGGCACGCCTCACGCTAACTGACGGCACGACCAAGGACTACAGCTACACGACCAAGCCCGCAGCGTACCCGGAACTGCTGGACACCAGCGACATCCCGTTCTACAAGCCGGGCAACGCTGACCCGAAGGAACCGGACCCGGAGTACCAGAAGAAGGTCAACGACCGAGTGAACGCCTACGAGGGCAACAAGACGGCGTGGATCAAGGAAGCTGCCGAGGACATCGTACCAGCCAACATCGCACGCAAGATCGCTGAGTTGATCGTGGCCGATGGGTACTTCGCAAGTTCGATGGAGTCCTGCGTCGTGATCGATGATCCGGCGTTCAACGACATCCGTATGCTGGACGATGGCGCTGGTACGCTGGTGTCGTACGCAGGCAAGGAAGTATCGGACCCGCAGTTCGTCACCCTGTACCACTGGTCCGGCAAGGTCGTCCGTGTCCGCCCGAGTGGCGGCGGCGACAAGGAAAGCTACTACCTCAAGGCCGTACCGCTCGACGGCGCTGACGGCTGGGCCAAGGTAGAGTGGGTGGAGACTGCCGGTGTTGTGCACGAGATTCACAACGTCGTGTCCCAGCTGATCGTGGACGTGCCGAACAAGAAGGCGTACGTTGCGCAGGACGGGCAGGGCTTGAAGTCTCTGGCTCCGCACATGGGCGACCATCCGCTGTACAAGTCCAACGCTGTTGGCGATGCCGTCACCGCTCCGCTGCCGCACTACTTCGGTCGGCCGATCACCTGCATGACGGTGTTCCAAGATCGACTGATGCTCAGCGCTGACAACATCGTGAACTTCTCGCGCTCCTCGGACTACCTGAACTTCTTCCGGCAGACCGTGCTGAACGTGCAGGAGAACGACCCCATCGAAATCTTCGCCCACGGTTCCGAGGGTGACACGATTAAGAAGGCGGTCATGTTCGAGCGTGACCTCGTGCTGTTCGGCGAGTTGCGCCAGTACGCGATCAGTGGTCGTGAGTTCCTGTCCCCGACGAATCCGAACATCAACGTGATCGGTGCGTTCGAGGGCGGTGCTACCGCGAACCCGATTGTCTCCGGCAACTTCCTGTTCTTCGGTAAGCACGCAAACGAGCGTACTGGTCTGCACCAGATGCAGCCGGGCGATACTCCGCAGACCACCGTGGTGTACGAGGTGTCGCAGGAACTGGACTCGTGGATCAGCGGTGAGCCGGTGCAGCTGCTGGGCATGACCCAGCCGGACATGGTGACTTACCGTACGGACGCCGACAGTTCGATTTGGTACACGTACAAGTACAGTGATGATCGCTCCGTTGGCCGTATCATGTCCAGCTGGGGCAAGCAGCAGTACGCGCCGGAACTCGGCTCGGTTGCTTCCATCACGCACTACCGTGGCGATCAGTTCGTTGTCACCCTGCGCACCGCAGGCGGCAAGGACTACTGGTTCGCCGACCGGCTTAACCTCAACGCTGACCTGTCGAAGCTCCCGCATCTGGACTCCCAAGTCCCGTACGGTAGCGAGACGGAATGGCACAAGGCCGTGCAAGAGAAGCTGTTCGTGGCAGCAACGGCAGAGTCGGACTACTACCTGATGGGCGCACCGCGTTCGCAGGCAGAGGACTTCATCGAGCAGGCTCCGGGTGTTGAACCGGCATTGGTCGTGGGCAGTGTATCGCCCGCGTACTTCCAGTTGACGAATCCCTACATGCGCGATTCGCAGGGTCAGCCCATTCTCAACGGGCGACTGACTCTTACTTCGTACGGCTTCCATCTGGCGGACACCGGCGGCCTCTCGGCCTACGTGTTGGCTCCGACCAAGGATCGTACTTTGCTGTTTGAGGGCCGCGTGCTGGGGCATACCAGCAACATCATCGGGCGTCAGCCGGTCTTCTCCGGCATGCGTACCGTAAGCGTAGGCAAGGAAACCCGAGCCTGCATCGTTGAACTGCGGTCCGAGGACTGGCAGCCTCTTCGCGTCACTGGCGCTGAGTGGTCTGGTCAGGTCTTCATGCCGCGCGCACGAGGGCTGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b63a067c2204ddb0204eec7883f4d363e091c55838fb8d691c66487e7ad4fe75
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3065
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Enhanced Suppression of Stenotrophomonas maltophilia by a Three-Phage Cocktail: Genomic Insights and Kinetic Profiling Monsibais,A.N., Tea,O., Ghatbale,P., Whiteson,K.L. and Pride,D. — — GenBank