Protein

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Genbank accession
UPW37241.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MATSTVIPDDIKTLKSDVSKLKNDQGSYATKSYVDSKDETVGDWSASWYQQVLPTSGAIFGRKLRSTHRTAGVEDAYCELYLKKWIDSPGNAMARLNLNDNGTNICWDFTNLYGGTMIFPGDSGYLKMGNCLMSYSKRGSNALIKFDYTDTLQIKYANHGSTMTLNTQGTAHAGVTTRLWGNSSRPVVYEVGVDEALYMFYAQKTTSNTYELTVNGACNASAFNQGSDRDLKDNIQVIDNATDRIRKMNGYTYTLKENGMPYAGVIAQETLEAIPEAVGAMMKYQDGASGSEGGEGERYYTVDYSGITGLLVQVARESDDRITKLESEVQELKAIVKTLLTDSDTSSTDLP
Physico‐chemical
properties
protein length:351 AA
molecular weight: 38574,53130 Da
isoelectric point:4,94115
aromaticity:0,09117
hydropathy:-0,47550

Domains

Domains [InterPro]
DC_0421
STR
9–349
DC_0421
IPR030392
CHP
227–329
IPR030392
IPR030392
CHP
227–278
IPR030392 Coil
UPW37241.1
1 351
Architecture
STR
STR 9-349 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW37241.1
1 351
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5023
Central domain 11 205 196 0,2542
C-terminal 206 351 145 0,9795
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-205
C-terminal
206-351

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_ESCO3
[NCBI] 		2918878 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW37241.1 [NCBI]
Genbank nucleotide accession
OM386652.1 [NCBI]
CDS location
range 56744 -> 57799
strand +
CDS
ATGGCTACATCGACAGTAATTCCTGATGACATCAAAACGCTAAAATCCGATGTTAGTAAACTAAAAAACGATCAAGGAAGCTACGCAACAAAATCATATGTAGACAGCAAAGATGAAACCGTTGGTGACTGGTCTGCTTCATGGTATCAGCAGGTATTGCCAACTAGCGGAGCTATATTTGGGAGAAAACTCCGCTCAACTCACAGGACGGCAGGTGTTGAGGATGCGTATTGCGAACTATACCTCAAAAAATGGATAGACAGTCCAGGTAACGCAATGGCGCGCCTTAACCTGAACGATAACGGGACAAACATTTGCTGGGACTTTACCAACCTTTATGGCGGTACGATGATTTTTCCCGGTGACAGCGGATACCTCAAAATGGGTAACTGCCTTATGTCATACAGCAAGCGTGGAAGTAACGCGCTTATTAAATTTGATTACACCGACACATTACAGATCAAATATGCTAATCATGGGTCAACCATGACATTAAACACACAGGGAACCGCTCACGCTGGCGTAACAACTAGACTATGGGGTAATTCTAGCCGTCCGGTTGTTTATGAAGTTGGCGTAGATGAGGCTCTGTATATGTTCTACGCACAGAAAACTACCAGCAATACCTACGAATTAACGGTTAACGGCGCGTGCAATGCAAGTGCATTTAATCAAGGCTCTGACCGGGATCTGAAAGACAATATTCAGGTGATCGATAATGCAACCGACCGCATTCGTAAAATGAACGGCTATACATACACGCTTAAAGAAAACGGTATGCCTTACGCTGGTGTTATTGCACAAGAAACCCTGGAAGCCATCCCCGAAGCCGTAGGGGCTATGATGAAATATCAGGACGGTGCAAGCGGATCGGAAGGTGGAGAAGGTGAACGTTATTACACAGTAGATTATTCTGGTATTACTGGCTTGCTTGTTCAGGTAGCCAGAGAGTCAGATGACAGAATAACAAAACTAGAGTCCGAAGTCCAGGAACTCAAAGCTATTGTAAAAACTTTGTTAACAGATAGCGACACATCTTCAACTGACTTACCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
873fb02f3afb790b3aeec63c0b067bf8de2facb903c1f0c10f1b59ceb29e04a8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7301
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank