Protein
View in Explore- Genbank accession
- CAO2432533.1 [GenBank]
- Protein name
- major tail protein
- RBP type
-
TSP
- Protein sequence
-
MHLPNGSQIFIGVNMGEPIQATAISNADDPVFTTANTQSIKKGAYVLIETSSWGKLVSRVLRVKEVSDDASVTLEGVSTKDTNVFPAGSNTATFREVKSWVEIPCVQDLAQDGGEQQYYTYQCLADDQEQQLPTYKSAVSLTYTFAHEYDNPIYPILREAEESGDVTALRMYVPKAKEMRCWAGVLSFNDIPQTTMNEMETVSLSVSLKGRFTFLSSDIN
- Physico‐chemical
properties -
protein length: 220 AA molecular weight: 24361,04370 Da isoelectric point: 4,60529 aromaticity: 0,09091 hydropathy: -0,27273
Domains
Domains [InterPro]
DC_0037
ATT
1–50
ATT
1–50
1
220
Architecture
ATT 1-50 | TAS 51-216 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
220
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 23 | 23 | 0,7822 |
| Central domain | 24 | 209 | 187 | 0,0689 |
| C-terminal | 210 | 220 | 10 | 0,6067 |
Note: Constraints were applied during segmentation.
Fixed 5 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 5 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-23
1-23
Central
24-209
24-209
C-terminal
210-220
210-220
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAO2432533.1
[NCBI]
Genbank nucleotide accession
OZ346160
[NCBI]
CDS location
range 9416 -> 10078
strand +
strand +
CDS
ATGCACTTGCCTAATGGTTCTCAAATTTTCATCGGCGTTAATATGGGTGAGCCTATTCAGGCTACGGCTATTTCAAATGCTGATGATCCTGTTTTTACGACTGCAAACACTCAAAGCATCAAAAAAGGCGCTTATGTTCTTATTGAAACATCTTCCTGGGGCAAACTTGTTAGTCGCGTGCTTCGAGTTAAGGAGGTATCAGATGATGCAAGCGTTACTCTTGAGGGTGTAAGCACGAAAGACACCAATGTTTTTCCGGCTGGTTCTAATACAGCAACTTTCCGAGAGGTGAAATCTTGGGTAGAGATTCCTTGCGTACAGGATCTTGCGCAGGACGGCGGCGAACAACAGTATTACACTTATCAGTGTTTGGCTGATGACCAGGAGCAGCAGTTACCGACCTATAAGAGCGCCGTTTCTCTTACCTACACTTTCGCGCATGAATATGATAACCCGATTTATCCGATCTTGCGCGAGGCTGAGGAATCCGGCGACGTAACCGCTTTGCGTATGTACGTTCCGAAAGCTAAAGAGATGCGTTGCTGGGCTGGCGTATTGTCCTTTAATGACATTCCGCAAACCACTATGAACGAAATGGAAACTGTTTCCCTTTCCGTATCTCTGAAAGGTCGATTTACGTTCTTATCTTCCGACATCAATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
8ab7a97bea90c13290e4cbdf56789b5810ee9203cbc8495cd7245a37fc8e2bae
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50