Protein

View in Explore
Genbank accession
YP_010078808.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAAVQFANNAASRLVGPLAPSGTSLTVTPGDGALFPTLGAGDWFMATLIRSDGAREIVKVTSRTVDAMSITRAQEGSSALSFNPNDRIEARLTAGELGDFRDGIASAQSAASAAQGTADGKISKAGDTMTGNLNMEGAAPIITFRETDQAAPAGRWRLVADGGNWSLRRSTAGEFASENSTMWFGPDDSVHFLNDILIGRGNLGSVYDALASKATSAALASGLSAKPDADGVSVTGFVNGNFYEPYFRKSSDNTVRRLVANTSANGIALSWSGSFLSRTIDNTATATIWDTANAPGAGTTNLDKTFYCGDGTRIGRSWVPGSGFLSITVDGTNYGISISASDERLKREIAPSEASALSKLGRIELFSFRYKEGNAFLDPSQHHDIGFIAQQLASVDPTFVAGGGETMLSPNLQPIVATLVKAVQELRSQVDALKAQVGA
Physico‐chemical
properties
protein length:439 AA
molecular weight: 45854,46080 Da
isoelectric point:5,18419
aromaticity:0,07517
hydropathy:-0,12141

Domains

Domains [InterPro]
DC_0891
STR
1–436
DC_0891
IPR030392
CHP
341–400
IPR030392 Coil
IPR030392
CHP
341–437
IPR030392
YP_010078808.1
1 439
Architecture
STR
STR 1-437 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage GP4
[NCBI] 		2282904 Uroviricota > Caudoviricetes > Gervaisevirus >
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010078808.1 [NCBI]
Genbank nucleotide accession
NC_054964.1 [NCBI]
CDS location
range 54644 -> 55963
strand -
CDS
ATGGCTGCCGTTCAATTCGCAAACAACGCTGCTAGCCGTCTTGTCGGCCCGCTGGCGCCTTCCGGTACGTCATTGACGGTCACGCCTGGGGATGGCGCGCTTTTCCCGACGCTAGGCGCTGGCGATTGGTTCATGGCAACGCTCATCCGATCGGATGGCGCGCGCGAGATCGTCAAGGTGACGTCGCGCACGGTGGACGCCATGTCCATCACGCGCGCGCAGGAGGGCTCGTCTGCGCTGTCGTTCAACCCGAACGATCGCATCGAGGCGCGCCTGACCGCTGGCGAACTCGGCGACTTCCGTGACGGCATCGCGTCCGCACAGAGTGCCGCCAGTGCCGCGCAGGGCACGGCCGATGGCAAGATTTCCAAGGCTGGCGACACCATGACCGGCAACCTCAACATGGAGGGCGCCGCGCCGATTATCACGTTCCGCGAGACGGATCAGGCCGCTCCGGCGGGGCGCTGGCGCCTCGTGGCAGATGGCGGAAACTGGTCGTTGCGCCGGAGCACGGCGGGCGAGTTCGCCTCCGAGAACAGCACGATGTGGTTCGGTCCGGACGACAGCGTGCACTTCTTGAACGACATTCTGATCGGCCGTGGCAACCTGGGATCGGTGTATGACGCGCTGGCGAGCAAGGCCACCAGCGCGGCTCTGGCGAGCGGACTGTCCGCCAAGCCTGATGCGGATGGTGTTTCCGTTACTGGTTTCGTCAACGGCAATTTCTACGAGCCGTATTTCCGCAAGTCCTCTGACAACACCGTTCGGCGTCTCGTGGCGAACACCAGTGCAAATGGGATCGCCCTGTCGTGGTCTGGCTCGTTTCTGAGCCGAACGATCGACAACACGGCCACTGCGACGATCTGGGACACCGCAAATGCGCCCGGCGCCGGCACCACCAACCTCGACAAGACATTCTACTGCGGCGACGGCACGCGCATCGGGCGAAGCTGGGTGCCGGGCAGCGGCTTCCTTTCGATCACGGTCGACGGCACCAACTACGGCATCTCGATCAGCGCTTCCGACGAGCGTCTGAAGCGAGAGATCGCCCCGAGCGAGGCGAGCGCGCTGTCGAAGCTAGGCCGCATTGAGCTGTTCAGCTTCCGGTACAAGGAAGGCAATGCTTTCCTGGACCCGTCGCAGCACCACGATATCGGCTTCATCGCGCAGCAACTCGCCAGCGTTGACCCTACGTTCGTGGCCGGCGGCGGCGAAACGATGCTGTCCCCGAACCTTCAGCCCATCGTGGCGACGCTGGTGAAGGCGGTGCAGGAGCTGCGGTCACAGGTGGACGCCCTCAAGGCCCAGGTGGGCGCATGA

Genome Context

Genome Context

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Complete sequence of phage GP4 Wang,R., Tong,Y. and Liu,H. 2019-06-18 — GenBank