Protein

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Genbank accession
AUR97679.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIRKDVDYPGRWEAATTEYPMGKPKNRTTSTSKDGSYFEKKWFQDYEAFFGALLNEAEVSPNGSVDTAEDSQFFDALTSKINGDSSFTANGYQKLPSGLIIQWMLLPDNFGSEATAVFPIPFPNDAIFLGISQNGLVGTPSAFATQIDSPSQCKYKGASASGTSSRLIAIGY
Physico‐chemical
properties
protein length:173 AA
molecular weight: 18755,62180 Da
isoelectric point:4,69424
aromaticity:0,12717
hydropathy:-0,33873

Domains

Domains [InterPro]
DC_0934
STR
1–169
DC_0934
G3DSA:2.60.40.3940
RBD
85–173
G3DSA:2.60.40.3940
IPR054075
RBD
95–173
IPR054075
AUR97679.1
1 173
Architecture
STR
STR 1-173
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.243.O._10N.261.54.B5
[NCBI] 		1881266 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR97679.1 [NCBI]
Genbank nucleotide accession
MG592608.1 [NCBI]
CDS location
range 34717 -> 35238
strand +
CDS
ATGGCAATTAGAAAAGACGTAGATTATCCAGGCCGATGGGAGGCCGCTACAACAGAATACCCAATGGGAAAACCAAAAAATAGAACAACGTCAACCTCCAAGGATGGATCGTATTTTGAAAAGAAATGGTTTCAAGATTATGAAGCGTTTTTTGGTGCTCTATTAAATGAGGCTGAGGTTAGCCCTAATGGCAGTGTGGACACGGCTGAGGATAGTCAGTTTTTTGATGCTCTAACATCCAAGATTAACGGAGATTCATCATTTACAGCTAACGGCTATCAAAAGCTACCAAGTGGACTCATAATTCAGTGGATGCTGCTTCCAGACAACTTCGGTTCAGAGGCTACCGCTGTATTCCCGATACCCTTCCCAAATGATGCAATATTTCTTGGTATTAGCCAAAATGGATTGGTAGGGACTCCATCTGCGTTCGCAACTCAGATTGACAGCCCGTCTCAATGCAAGTACAAGGGCGCATCAGCATCAGGTACAAGCTCTAGGCTTATAGCTATAGGTTATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3985b4f8d554175e4bb66d70df1adbb4f2031d055719fb16b5dc6f12aefdedce
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank