Protein

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Genbank accession
QXO12242.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFPIMNKYGNTVVKNKIKKVLGSGRVVALLYDNGNLYMRGSNQYTNFGIASPSDYKNWVLVRTNVKEVWLNNYHTIIQTYDDQFLCAGYGRALGYGGTSYLWTVYDRLYTLTSTPATTVKQICLNIYGTFVLLNTNNNLYALGFNAYNCLGVGALNSTSTAFTLSRSGVKYVHSNLAGTFCIGTNNVLYARGLAQNYKMGNNSNTDMASWTTITLPAGYTYPVMAFEGYIHTLIYAASDSTLNDTAILYCGYTSTNPGGAIPPYGSNYTPTFRVGAGGTGNSFSSFGTGYLEIGHQSFYTDAGSTNLYSAGSAGPSLGSSTNKSTGFTVMPLPSTGITSFCSAGNTDTTGVTFVVQNNILYACGDVTWLDATTYNFLPQEVPE
Physico‐chemical
properties
protein length:385 AA
molecular weight: 41559,08280 Da
isoelectric point:8,03007
aromaticity:0,13506
hydropathy:-0,06260

Domains

Domains [InterPro]
DC_0433
ATT
1–130
DC_0433 DC_0918
IPR009091
STR
5–258
IPR009091 DC_1781
IPR009091
STR
17–339
IPR009091
DC_0436
RBD
108–189
DC_0436
QXO12242.1
1 385
Architecture
ATT
STR
RBD
ATT 1-130 | STR 131-339 | RBD 340-385
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO12242.1
1 385
Domain Start End Length (AA) Confidence
N-terminal 1 52 52 0,0613
Central domain 53 257 206 0,6536
C-terminal 258 385 127 0,2032
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-52
Central
53-257
C-terminal
258-385

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_44
[NCBI] 		2859282 No lineage information
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO12242.1 [NCBI]
Genbank nucleotide accession
MW879343 [NCBI]
CDS location
range 352253 -> 353410
strand -
CDS
ATGTTACCCTTTCCAATAATGAATAAGTATGGGAATACAGTAGTAAAAAATAAAATAAAGAAAGTACTTGGATCAGGTAGAGTTGTTGCATTATTATACGATAATGGTAATTTATACATGCGGGGTTCAAATCAATATACTAATTTTGGAATAGCTTCACCTAGTGATTATAAGAATTGGGTACTAGTACGGACGAATGTTAAAGAGGTTTGGTTAAACAATTATCACACTATAATACAAACATATGATGATCAATTCTTATGTGCTGGATATGGTAGAGCATTAGGATATGGTGGGACGAGTTATTTGTGGACGGTATATGATAGATTATACACACTAACCTCAACACCTGCAACGACAGTCAAGCAGATATGTTTAAACATATATGGAACATTTGTATTATTGAATACGAATAACAACTTATATGCTTTAGGATTTAACGCTTATAATTGTTTAGGGGTAGGTGCATTGAATAGTACTAGTACTGCATTTACGTTATCACGTTCAGGGGTGAAGTACGTTCACAGTAATCTAGCTGGAACGTTTTGTATAGGTACAAATAATGTATTGTATGCAAGGGGTTTAGCACAGAATTATAAGATGGGAAATAATAGTAATACTGACATGGCTTCATGGACTACTATAACATTACCTGCTGGATACACATATCCTGTCATGGCCTTTGAGGGATACATTCATACATTAATATATGCTGCATCTGATAGTACATTGAATGATACTGCAATATTATATTGTGGATACACATCTACGAATCCTGGTGGTGCTATACCTCCTTATGGTTCTAACTACACACCAACGTTTAGGGTTGGTGCTGGAGGAACTGGAAATTCATTTAGTTCATTTGGTACTGGATATTTAGAAATTGGTCACCAATCATTTTATACTGATGCAGGTAGTACAAATTTATATTCAGCGGGAAGTGCTGGGCCAAGTTTAGGTTCAAGTACTAACAAGAGTACTGGATTTACTGTTATGCCATTGCCTAGTACTGGAATTACATCATTTTGTTCAGCGGGAAATACTGATACTACAGGTGTTACATTTGTTGTACAGAATAATATATTATATGCCTGTGGTGATGTAACGTGGTTAGATGCGACTACATATAATTTTTTACCACAAGAGGTTCCAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4f3535a7822d3392b01f3149e2433088fbbb262378dcdc985680ce40e83be6f1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8258
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_44 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank