Protein

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Genbank accession

CAB4173649.1 [GenBank]

Protein name

Collagen triple helix repeat

RBP type

Evidence RBPdetect2

Probability 0,92

Protein sequence

GTTGATGPQGISVTLKGTKATAVLLPSSGQQAGDAWIVEADGDLYFWNVSAGTWDNIGQIVGPQGPTGATGTAATIAVGTVLTGITGSSVVVTNSGTSGAATLNFTIPTGATGATGATGATGTAATLAVGTVTTGITGSSATISNSGTTSAAVLDFSIPIGATGATGATGTAATIAVGTITTISSGSSATVSNSGTASAVLLDFSIPQGATGPTGNTGATGATGSTGTTGTAATLAVGTVTTGAAGGAVSVSNSGTSSAATLNFTIPIGDTGATGATGATGNTGTAATLAIGTVTTGTAGSSAIVSNSGTTSAATLNFTIPRGNTGDTGATGATGTAATLAVGTVATGAAGSSTLVSNSGTASAATFNFTIPRGDTGIQGATGNTGATGAAGATGTAATITIGTVITGTVGSSATVTNTGSSSAAVLDFSIPTGATGPQGATGATGATGPQGATGLQGATGPQGPTGPAGLTGDTGAAGTAGAAGAVGPAGATGSQGIQGIQGATGATGATGPQGDTGLTGPAGATGSQGIQGIQGNTGATGLTGPAGAVGPQGDTGLTGATGLTGPAGSQGIQGIQGATGTTGTTGQGIATGGTTGQVLVKLSNTDYDTGWAAQSGGGGGGSSVTVAATAPASPSTGSVWFNTENATMYIWTGTAWVEPSGGVAGPAGPAGSVLKITSISICNSSYTVLDDTAVSNTGGYIKLTGTNFAAGCIVTVGTINATTTTYVSATEVRAQLPATVAGSYTVYLTNTDGGTCFRLNAVTFSAPPVWSTGTYSSPTAVSTQLLATGDSTLTYTLTSGSLPSGITLSSSGLLSGTTTLNSYSFTVTATDAQLQDVSQVISLTIANVPPSAVEYLVVAGGGGGGSAVFNVDNGGGGGAGGYSTSTGFAVASGTPITVTVGAGGATATQGYNSQLGSLTASIGGGRGGTNGSFAGGSGGSGGGGAGVTGYTGGGSATSGQGNIGGNGNGSSWPGGGGGAGAAGGTAGVSPQTTGSGGVGLASSISGTSTYYAGGGGGSGSGATFPNGGNGGGGTGNASGTAGASGTANTGGGGGGGSGSGGAGAGGPGGSGIVIIRYADSYSAAASTTGSPTITNPTGYRVYKWTSSGSITF

Physico‐chemical properties

protein length:	1113 AA
molecular weight:	101263,01050 Da
isoelectric point:	4,06975
aromaticity:	0,04492
hydropathy:	0,15912

Domains

Domains [InterPro]

DC_1340
STR
1–205

DC_1340 DC_1769 IPR050149 IPR014756 DC_2052

DC_1769
STR
281–336

DC_1769 DC_1769 DC_1341 DC_0582 IPR049304

DC_1769
STR
333–397

DC_1769 IPR008160 DC_0929

CAB4173649.1

1 1113

Architecture

STR

RBD

STR 1-205 | STR 228-458 | STR 482-549 | STR 624-669 | STR 697-756 | STR 778-1078 | RBD 1079-1113

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1340	STR	DC_1340	1	205	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1769	STR	DC_1769	228	285	Novel HMM	DC_1769	Central	Low	Positional only	52 proteins / 52 hits
DC_1769	STR	DC_1769	281	336	Novel HMM	DC_1769	Central	Low	Positional only	52 proteins / 52 hits
IPR050149	Unmapped	-	323	669	InterPro	Collagen superfamily	-	-	-	-
DC_1769	STR	DC_1769	333	397	Novel HMM	DC_1769	Central	Low	Positional only	52 proteins / 52 hits
DC_1769	STR	DC_1769	390	458	Novel HMM	DC_1769	Central	Low	Positional only	52 proteins / 52 hits
DC_1341	STR	DC_1341	482	549	Novel HMM	DC_1341	Central	Low	Positional only	76 proteins / 76 hits
IPR008160	STR	DC_0536	486	542	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_0582	STR	DC_0582	624	669	Novel HMM	DC_0582	Central	Low	Positional only	49 proteins / 49 hits
IPR014756	STR	IPR014756	697	756	Merged direct domain	Immunoglobulin E-set	Central	Low	Positional only	3 proteins / 3 hits
DC_2052	STR	DC_2052	778	1005	Novel HMM	DC_2052	Central	Low	Positional only	44 proteins / 44 hits
IPR049304	STR	DC_0631	852	1078	InterPro cluster	Glycine-rich domain	C-terminal	Low	Positional only	225 proteins / 228 hits
DC_0929	RBD	DC_0929	981	1113	Novel HMM	DC_0929	C-terminal	Low	Positional only	25 proteins / 25 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	uncultured Caudovirales phage [NCBI]	2100421	Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

CAB4173649.1 [NCBI]

Genbank nucleotide accession

LR796912 [NCBI]

CDS location

range 2 -> 3343
strand +

CDS

GGTACTACAGGTGCGACTGGACCACAAGGTATTTCTGTAACTCTTAAAGGTACTAAAGCTACTGCAGTTTTATTACCAAGTTCTGGGCAACAAGCAGGAGATGCTTGGATTGTTGAAGCAGATGGTGATTTGTATTTTTGGAATGTTTCTGCAGGTACATGGGATAATATAGGACAAATAGTAGGGCCACAAGGCCCAACAGGTGCTACAGGTACAGCAGCTACAATAGCTGTAGGAACTGTACTAACAGGTATTACTGGAAGTTCTGTAGTAGTAACTAACTCTGGTACTAGTGGGGCCGCCACTCTTAATTTTACAATCCCTACAGGTGCAACAGGTGCTACGGGTGCTACGGGTGCAACAGGTACTGCAGCTACATTAGCTGTAGGAACAGTTACAACAGGTATTACTGGAAGTTCCGCTACTATTAGTAATTCAGGAACTACTTCAGCAGCCGTTCTAGATTTTAGTATACCTATAGGTGCTACAGGTGCTACAGGTGCTACAGGTACTGCAGCTACAATAGCTGTAGGAACAATTACAACTATATCTTCCGGTAGTTCTGCTACTGTAAGTAATTCAGGTACTGCTTCAGCAGTACTTTTAGATTTTAGTATTCCTCAAGGGGCCACGGGTCCCACAGGTAATACAGGTGCAACAGGTGCTACAGGTTCTACAGGTACTACGGGTACTGCAGCTACATTAGCTGTAGGAACAGTTACAACAGGCGCAGCAGGTGGAGCTGTTTCAGTAAGTAATTCTGGTACTAGTTCTGCAGCAACACTTAATTTTACAATTCCTATAGGTGATACTGGTGCTACAGGTGCCACAGGTGCCACAGGTAATACAGGTACTGCAGCTACATTAGCCATAGGAACAGTTACAACAGGAACTGCAGGTAGTTCTGCTATTGTAAGTAATTCAGGTACTACCTCAGCAGCAACACTTAACTTCACAATTCCTAGAGGAAATACGGGGGATACTGGTGCTACAGGTGCTACAGGTACTGCAGCTACATTAGCCGTAGGAACAGTAGCAACAGGTGCAGCAGGTAGTTCCACTTTAGTAAGTAATTCAGGTACTGCCTCAGCAGCAACATTTAATTTTACAATTCCTAGAGGTGATACAGGTATACAGGGTGCTACAGGTAATACGGGTGCTACAGGTGCAGCAGGTGCTACAGGTACAGCAGCTACAATAACTATAGGTACAGTTATAACAGGGACAGTAGGAAGTTCTGCTACGGTTACTAATACTGGCTCTTCTTCAGCTGCAGTTTTAGATTTTAGTATACCTACAGGTGCTACAGGCCCACAAGGTGCTACAGGTGCTACAGGTGCTACAGGTCCACAAGGTGCTACAGGCCTACAGGGTGCTACAGGTCCACAAGGACCTACAGGACCAGCAGGTCTTACAGGTGATACAGGTGCTGCAGGTACTGCAGGTGCTGCAGGTGCAGTAGGTCCTGCAGGTGCTACAGGTTCTCAAGGTATTCAGGGTATTCAAGGTGCTACAGGTGCTACAGGTGCCACAGGTCCTCAAGGTGATACAGGTCTTACAGGGCCTGCAGGTGCTACAGGTTCTCAAGGTATTCAAGGTATTCAAGGTAATACAGGTGCTACAGGTCTCACAGGTCCTGCGGGTGCTGTGGGACCTCAAGGTGATACAGGTCTTACAGGAGCTACAGGACTTACAGGTCCTGCCGGTTCTCAAGGTATTCAGGGTATTCAAGGTGCTACAGGTACTACAGGTACTACAGGTCAGGGAATTGCTACAGGTGGTACAACTGGACAAGTATTAGTTAAATTATCTAATACTGACTATGATACTGGATGGGCGGCACAGTCTGGTGGTGGGGGAGGGGGATCTTCAGTTACAGTTGCAGCAACTGCACCTGCAAGTCCTTCTACAGGTAGTGTTTGGTTTAATACTGAAAATGCTACCATGTATATTTGGACAGGTACTGCATGGGTAGAGCCTTCTGGAGGGGTAGCCGGCCCTGCCGGCCCTGCGGGTTCTGTACTTAAAATTACTAGTATATCAATATGTAACTCTAGCTATACTGTTTTAGACGATACCGCAGTTAGTAATACTGGCGGATATATTAAATTAACTGGTACAAATTTTGCTGCGGGATGTATAGTTACAGTTGGTACTATTAATGCTACAACTACTACGTATGTAAGTGCTACGGAAGTAAGAGCTCAATTACCTGCTACAGTTGCTGGTTCTTATACGGTATATTTAACTAACACTGATGGGGGTACTTGTTTTAGACTTAATGCAGTCACCTTTAGTGCTCCGCCAGTATGGAGTACTGGAACTTATAGCTCCCCCACAGCGGTTAGTACCCAATTATTAGCTACTGGTGATAGTACATTAACATACACTCTTACTAGTGGTAGTCTACCTAGTGGGATTACATTAAGTAGTAGTGGACTTTTATCAGGAACTACTACATTAAATTCATATTCCTTTACTGTTACAGCTACTGATGCTCAGTTACAAGATGTAAGCCAAGTTATTAGTTTAACTATTGCTAATGTTCCGCCTTCTGCAGTTGAATACTTGGTTGTTGCTGGCGGCGGTGGTGGTGGCTCCGCTGTGTTTAATGTCGATAATGGGGGTGGAGGCGGTGCCGGTGGATATAGTACATCAACCGGATTTGCAGTTGCATCCGGCACTCCAATCACAGTAACGGTTGGGGCCGGGGGTGCAACAGCGACTCAAGGTTACAATTCTCAACTAGGATCTTTAACTGCTTCTATTGGTGGTGGGCGTGGCGGCACCAACGGTAGTTTTGCTGGTGGGTCCGGTGGCTCTGGTGGTGGTGGGGCCGGCGTTACTGGTTATACTGGCGGTGGTAGTGCAACTAGTGGTCAAGGTAATATAGGTGGTAATGGCAATGGAAGTAGTTGGCCTGGTGGTGGGGGTGGTGCTGGTGCTGCTGGAGGCACTGCTGGAGTATCCCCTCAAACAACAGGTTCCGGAGGTGTTGGTTTGGCATCTTCTATTTCTGGAACATCAACTTACTATGCGGGCGGTGGTGGTGGATCTGGTTCAGGCGCAACTTTCCCTAATGGTGGAAATGGGGGTGGCGGCACTGGAAATGCATCTGGTACTGCTGGAGCAAGTGGCACAGCTAATACTGGCGGTGGCGGTGGTGGTGGCAGTGGTAGTGGGGGTGCAGGTGCAGGTGGCCCTGGTGGTTCAGGTATTGTAATCATTCGCTATGCAGATTCATATTCTGCTGCAGCTTCAACTACAGGCTCTCCTACAATTACTAATCCCACGGGATATAGAGTTTACAAATGGACCAGTTCTGGTTCAATAACATTTTAA

Genome Context

Tertiary structure

PDB ID

914470ebee5b15cdbbcd2e4c2837cb564609175254dfdbe558a39ad7ab430a68

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,2776

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence